Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDKAL1Q5VV42 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.81■■□□□ 1.4
CDKAL1Q5VV42 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
CDKAL1Q5VV42 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.81■■□□□ 1.4
CDKAL1Q5VV42 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDKAL1Q5VV42 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.81■■□□□ 1.4
CDKAL1Q5VV42 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CDKAL1Q5VV42 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDKAL1Q5VV42 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CDKAL1Q5VV42 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.81■■□□□ 1.4
CDKAL1Q5VV42 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.8■■□□□ 1.4
CDKAL1Q5VV42 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
CDKAL1Q5VV42 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDKAL1Q5VV42 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDKAL1Q5VV42 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDKAL1Q5VV42 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.8■■□□□ 1.4
CDKAL1Q5VV42 AC079089.2-201ENST00000531211 1277 ntBASIC23.8■■□□□ 1.4
CDKAL1Q5VV42 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.8■■□□□ 1.4
CDKAL1Q5VV42 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.8■■□□□ 1.4
CDKAL1Q5VV42 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDKAL1Q5VV42 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CDKAL1Q5VV42 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CDKAL1Q5VV42 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDKAL1Q5VV42 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDKAL1Q5VV42 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CDKAL1Q5VV42 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CDKAL1Q5VV42 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.79■■□□□ 1.4
CDKAL1Q5VV42 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.79■■□□□ 1.4
CDKAL1Q5VV42 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CDKAL1Q5VV42 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 AC026471.6-201ENST00000622954 1905 ntBASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 pRNA.6-201ENST00000610482 90 ntBASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 pRNA.5-201ENST00000612139 90 ntBASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 pRNA.11-201ENST00000618423 90 ntBASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 pRNA.13-201ENST00000619112 90 ntBASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 Z98882.1-201ENST00000622160 2253 ntBASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CDKAL1Q5VV42 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC23.77■■□□□ 1.4
CDKAL1Q5VV42 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDKAL1Q5VV42 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDKAL1Q5VV42 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.77■■□□□ 1.4
CDKAL1Q5VV42 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.77■■□□□ 1.4
CDKAL1Q5VV42 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
CDKAL1Q5VV42 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDKAL1Q5VV42 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CDKAL1Q5VV42 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDKAL1Q5VV42 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.77■■□□□ 1.4
CDKAL1Q5VV42 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDKAL1Q5VV42 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CDKAL1Q5VV42 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.77■■□□□ 1.4
CDKAL1Q5VV42 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDKAL1Q5VV42 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
CDKAL1Q5VV42 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CDKAL1Q5VV42 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDKAL1Q5VV42 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC23.76■■□□□ 1.39
CDKAL1Q5VV42 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CDKAL1Q5VV42 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CDKAL1Q5VV42 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDKAL1Q5VV42 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.75■■□□□ 1.39
CDKAL1Q5VV42 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDKAL1Q5VV42 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDKAL1Q5VV42 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDKAL1Q5VV42 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CDKAL1Q5VV42 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CDKAL1Q5VV42 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.75■■□□□ 1.39
CDKAL1Q5VV42 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.75■■□□□ 1.39
CDKAL1Q5VV42 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDKAL1Q5VV42 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
CDKAL1Q5VV42 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.74■■□□□ 1.39
CDKAL1Q5VV42 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC23.74■■□□□ 1.39
CDKAL1Q5VV42 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDKAL1Q5VV42 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.74■■□□□ 1.39
CDKAL1Q5VV42 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.74■■□□□ 1.39
CDKAL1Q5VV42 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.74■■□□□ 1.39
CDKAL1Q5VV42 AC099791.2-201ENST00000605725 427 ntBASIC23.74■■□□□ 1.39
CDKAL1Q5VV42 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDKAL1Q5VV42 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC23.74■■□□□ 1.39
CDKAL1Q5VV42 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CDKAL1Q5VV42 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDKAL1Q5VV42 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDKAL1Q5VV42 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CDKAL1Q5VV42 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDKAL1Q5VV42 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CDKAL1Q5VV42 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDKAL1Q5VV42 KRT16P3-201ENST00000439127 1283 ntBASIC23.73■■□□□ 1.39
CDKAL1Q5VV42 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.73■■□□□ 1.39
CDKAL1Q5VV42 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.73■■□□□ 1.39
CDKAL1Q5VV42 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC23.73■■□□□ 1.39
CDKAL1Q5VV42 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDKAL1Q5VV42 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.73■■□□□ 1.39
CDKAL1Q5VV42 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CDKAL1Q5VV42 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms