Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ARFGEF3Q5TH69 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.46■□□□□ 0.55
ARFGEF3Q5TH69 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
ARFGEF3Q5TH69 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ARFGEF3Q5TH69 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARFGEF3Q5TH69 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
ARFGEF3Q5TH69 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
ARFGEF3Q5TH69 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
ARFGEF3Q5TH69 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 AC004911.1-201ENST00000416316 871 ntBASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 KRT19P1-201ENST00000405746 1186 ntBASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 AC137761.2-201ENST00000561729 223 ntBASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 AC145350.3-201ENST00000569033 163 ntBASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.45■□□□□ 0.54
ARFGEF3Q5TH69 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ARFGEF3Q5TH69 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ARFGEF3Q5TH69 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.44■□□□□ 0.54
ARFGEF3Q5TH69 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.44■□□□□ 0.54
ARFGEF3Q5TH69 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.44■□□□□ 0.54
ARFGEF3Q5TH69 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ARFGEF3Q5TH69 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
ARFGEF3Q5TH69 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.44■□□□□ 0.54
ARFGEF3Q5TH69 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ARFGEF3Q5TH69 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.44■□□□□ 0.54
ARFGEF3Q5TH69 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.43■□□□□ 0.54
ARFGEF3Q5TH69 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARFGEF3Q5TH69 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARFGEF3Q5TH69 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARFGEF3Q5TH69 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARFGEF3Q5TH69 COX20-201ENST00000366528 568 ntTSL 2 BASIC18.43■□□□□ 0.54
ARFGEF3Q5TH69 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.43■□□□□ 0.54
ARFGEF3Q5TH69 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARFGEF3Q5TH69 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ARFGEF3Q5TH69 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.43■□□□□ 0.54
ARFGEF3Q5TH69 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARFGEF3Q5TH69 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARFGEF3Q5TH69 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
ARFGEF3Q5TH69 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.42■□□□□ 0.54
ARFGEF3Q5TH69 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.42■□□□□ 0.54
ARFGEF3Q5TH69 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.42■□□□□ 0.54
ARFGEF3Q5TH69 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARFGEF3Q5TH69 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARFGEF3Q5TH69 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARFGEF3Q5TH69 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.42■□□□□ 0.54
ARFGEF3Q5TH69 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARFGEF3Q5TH69 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.42■□□□□ 0.54
ARFGEF3Q5TH69 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
ARFGEF3Q5TH69 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
ARFGEF3Q5TH69 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.42■□□□□ 0.54
ARFGEF3Q5TH69 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ARFGEF3Q5TH69 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARFGEF3Q5TH69 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARFGEF3Q5TH69 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARFGEF3Q5TH69 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.4■□□□□ 0.54
ARFGEF3Q5TH69 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
ARFGEF3Q5TH69 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.4■□□□□ 0.54
ARFGEF3Q5TH69 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARFGEF3Q5TH69 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARFGEF3Q5TH69 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.4■□□□□ 0.54
ARFGEF3Q5TH69 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ARFGEF3Q5TH69 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ARFGEF3Q5TH69 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.4■□□□□ 0.54
ARFGEF3Q5TH69 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
ARFGEF3Q5TH69 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.4■□□□□ 0.54
ARFGEF3Q5TH69 VPS53-216ENST00000574029 585 ntTSL 4 BASIC18.4■□□□□ 0.54
ARFGEF3Q5TH69 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.39■□□□□ 0.54
ARFGEF3Q5TH69 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms