Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
UBR4Q5T4S7 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 DRD5P2-201ENST00000421395 2012 ntBASIC12.12□□□□□ -0.47
UBR4Q5T4S7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 CRYGFP-201ENST00000418459 633 ntBASIC12.12□□□□□ -0.47
UBR4Q5T4S7 KRT18P48-201ENST00000434763 852 ntBASIC12.12□□□□□ -0.47
UBR4Q5T4S7 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 USF2-207ENST00000595068 1612 ntTSL 5 BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 AC022898.2-201ENST00000616822 1312 ntBASIC12.12□□□□□ -0.47
UBR4Q5T4S7 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 TSPY7P-201ENST00000431358 1114 ntBASIC12.12□□□□□ -0.47
UBR4Q5T4S7 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 NMU-205ENST00000511469 756 ntTSL 3 BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
UBR4Q5T4S7 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 AC145285.6-201ENST00000604632 637 ntBASIC12.11□□□□□ -0.47
UBR4Q5T4S7 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 AL355075.4-201ENST00000554988 638 ntBASIC12.11□□□□□ -0.47
UBR4Q5T4S7 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 PVRIG2P-201ENST00000435460 978 ntBASIC12.11□□□□□ -0.47
UBR4Q5T4S7 AC007322.4-201ENST00000509611 723 ntBASIC12.11□□□□□ -0.47
UBR4Q5T4S7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 AC113347.1-201ENST00000413321 391 ntBASIC12.11□□□□□ -0.47
UBR4Q5T4S7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
UBR4Q5T4S7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 KRT18P57-201ENST00000443599 1254 ntBASIC12.1□□□□□ -0.47
UBR4Q5T4S7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
UBR4Q5T4S7 OR2A1-AS1-201ENST00000462305 773 ntBASIC12.09□□□□□ -0.47
UBR4Q5T4S7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
UBR4Q5T4S7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms