Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.1
KHDC1Q4VXA5 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
KHDC1Q4VXA5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
KHDC1Q4VXA5 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.89■■□□□ 1.09
KHDC1Q4VXA5 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KHDC1Q4VXA5 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
KHDC1Q4VXA5 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KHDC1Q4VXA5 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KHDC1Q4VXA5 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
KHDC1Q4VXA5 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
KHDC1Q4VXA5 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 EDA-201ENST00000338901 1233 ntBASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 SUDS3P1-201ENST00000505831 966 ntBASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 AP001330.3-201ENST00000520123 633 ntBASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 AC010525.1-201ENST00000585559 441 ntBASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
KHDC1Q4VXA5 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 SLC47A1P1-202ENST00000449666 945 ntBASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 AC242852.2-201ENST00000615738 1807 ntBASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.87■■□□□ 1.09
KHDC1Q4VXA5 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.86■■□□□ 1.09
KHDC1Q4VXA5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.86■■□□□ 1.09
KHDC1Q4VXA5 AF213884.3-201ENST00000563833 479 ntBASIC21.86■■□□□ 1.09
KHDC1Q4VXA5 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.86■■□□□ 1.09
KHDC1Q4VXA5 AL355001.2-201ENST00000620617 1191 ntBASIC21.86■■□□□ 1.09
KHDC1Q4VXA5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
KHDC1Q4VXA5 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KHDC1Q4VXA5 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
KHDC1Q4VXA5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KHDC1Q4VXA5 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
KHDC1Q4VXA5 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
KHDC1Q4VXA5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.86■■□□□ 1.09
KHDC1Q4VXA5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.85■■□□□ 1.09
KHDC1Q4VXA5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KHDC1Q4VXA5 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
KHDC1Q4VXA5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
KHDC1Q4VXA5 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KHDC1Q4VXA5 AL136967.2-201ENST00000623968 743 ntBASIC21.85■■□□□ 1.09
KHDC1Q4VXA5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
KHDC1Q4VXA5 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.85■■□□□ 1.09
KHDC1Q4VXA5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
KHDC1Q4VXA5 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.85■■□□□ 1.09
KHDC1Q4VXA5 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
KHDC1Q4VXA5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.84■■□□□ 1.09
KHDC1Q4VXA5 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KHDC1Q4VXA5 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
KHDC1Q4VXA5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
KHDC1Q4VXA5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
KHDC1Q4VXA5 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KHDC1Q4VXA5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
KHDC1Q4VXA5 MIR939-201ENST00000401314 82 ntBASIC21.84■■□□□ 1.09
KHDC1Q4VXA5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.84■■□□□ 1.09
KHDC1Q4VXA5 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
KHDC1Q4VXA5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
KHDC1Q4VXA5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
KHDC1Q4VXA5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
KHDC1Q4VXA5 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
KHDC1Q4VXA5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
KHDC1Q4VXA5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
KHDC1Q4VXA5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
KHDC1Q4VXA5 OR2I1P-207ENST00000453522 948 ntBASIC21.83■■□□□ 1.09
KHDC1Q4VXA5 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.83■■□□□ 1.09
KHDC1Q4VXA5 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
KHDC1Q4VXA5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
KHDC1Q4VXA5 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.82■■□□□ 1.08
KHDC1Q4VXA5 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KHDC1Q4VXA5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
KHDC1Q4VXA5 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.82■■□□□ 1.08
KHDC1Q4VXA5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.82■■□□□ 1.08
KHDC1Q4VXA5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.82■■□□□ 1.08
KHDC1Q4VXA5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.82■■□□□ 1.08
KHDC1Q4VXA5 AC008764.7-201ENST00000593779 1081 ntBASIC21.82■■□□□ 1.08
KHDC1Q4VXA5 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.82■■□□□ 1.08
KHDC1Q4VXA5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
KHDC1Q4VXA5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms