Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCSMST1Q4G0I0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CCSMST1Q4G0I0 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CCSMST1Q4G0I0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.13■□□□□ 0.97
CCSMST1Q4G0I0 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CCSMST1Q4G0I0 ECEL1P1-201ENST00000373592 1742 ntBASIC21.12■□□□□ 0.97
CCSMST1Q4G0I0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCSMST1Q4G0I0 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CCSMST1Q4G0I0 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CCSMST1Q4G0I0 AC105265.2-201ENST00000467189 838 ntBASIC21.12■□□□□ 0.97
CCSMST1Q4G0I0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCSMST1Q4G0I0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCSMST1Q4G0I0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CCSMST1Q4G0I0 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCSMST1Q4G0I0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CCSMST1Q4G0I0 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCSMST1Q4G0I0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.11■□□□□ 0.97
CCSMST1Q4G0I0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
CCSMST1Q4G0I0 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.11■□□□□ 0.97
CCSMST1Q4G0I0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.11■□□□□ 0.97
CCSMST1Q4G0I0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCSMST1Q4G0I0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CCSMST1Q4G0I0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CCSMST1Q4G0I0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CCSMST1Q4G0I0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCSMST1Q4G0I0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.09■□□□□ 0.97
CCSMST1Q4G0I0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCSMST1Q4G0I0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCSMST1Q4G0I0 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCSMST1Q4G0I0 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CCSMST1Q4G0I0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCSMST1Q4G0I0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCSMST1Q4G0I0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.08■□□□□ 0.97
CCSMST1Q4G0I0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.08■□□□□ 0.97
CCSMST1Q4G0I0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.08■□□□□ 0.97
CCSMST1Q4G0I0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.08■□□□□ 0.97
CCSMST1Q4G0I0 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCSMST1Q4G0I0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
CCSMST1Q4G0I0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CCSMST1Q4G0I0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCSMST1Q4G0I0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
CCSMST1Q4G0I0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCSMST1Q4G0I0 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCSMST1Q4G0I0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.07■□□□□ 0.96
CCSMST1Q4G0I0 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCSMST1Q4G0I0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.07■□□□□ 0.96
CCSMST1Q4G0I0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCSMST1Q4G0I0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.07■□□□□ 0.96
CCSMST1Q4G0I0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.07■□□□□ 0.96
CCSMST1Q4G0I0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCSMST1Q4G0I0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.07■□□□□ 0.96
CCSMST1Q4G0I0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCSMST1Q4G0I0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCSMST1Q4G0I0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.06■□□□□ 0.96
CCSMST1Q4G0I0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms