Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 RASSF1-AS1-201ENST00000629828 790 ntBASIC14.3□□□□□ -0.12
SYCNQ0VAF6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
SYCNQ0VAF6 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 DUX4L19-201ENST00000557448 1267 ntBASIC14.29□□□□□ -0.12
SYCNQ0VAF6 MIR3181-201ENST00000578512 73 ntBASIC14.29□□□□□ -0.12
SYCNQ0VAF6 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 AL512631.2-201ENST00000604634 923 ntBASIC14.29□□□□□ -0.12
SYCNQ0VAF6 CA15P2-201ENST00000611168 834 ntBASIC14.29□□□□□ -0.12
SYCNQ0VAF6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SYCNQ0VAF6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SYCNQ0VAF6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC14.27□□□□□ -0.12
SYCNQ0VAF6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SYCNQ0VAF6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC14.27□□□□□ -0.12
SYCNQ0VAF6 AC137767.1-201ENST00000602918 1920 ntBASIC14.27□□□□□ -0.12
SYCNQ0VAF6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SYCNQ0VAF6 C11orf96-202ENST00000528572 1834 ntBASIC14.27□□□□□ -0.12
SYCNQ0VAF6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SYCNQ0VAF6 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
SYCNQ0VAF6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SYCNQ0VAF6 SYT6-210ENST00000641643 1587 ntBASIC14.27□□□□□ -0.12
SYCNQ0VAF6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
SYCNQ0VAF6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SYCNQ0VAF6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC14.27□□□□□ -0.12
SYCNQ0VAF6 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SYCNQ0VAF6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SYCNQ0VAF6 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SYCNQ0VAF6 AC087239.1-201ENST00000622671 572 ntBASIC14.27□□□□□ -0.13
SYCNQ0VAF6 AC068587.7-201ENST00000641602 218 ntBASIC14.27□□□□□ -0.13
SYCNQ0VAF6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SYCNQ0VAF6 LINC00565-201ENST00000562710 2331 ntBASIC14.27□□□□□ -0.13
SYCNQ0VAF6 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SYCNQ0VAF6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC14.27□□□□□ -0.13
SYCNQ0VAF6 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SYCNQ0VAF6 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
SYCNQ0VAF6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SYCNQ0VAF6 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SYCNQ0VAF6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SYCNQ0VAF6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SYCNQ0VAF6 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms