Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
EFNB1P98172 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.46■□□□□ 0.71
EFNB1P98172 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EFNB1P98172 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EFNB1P98172 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EFNB1P98172 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
EFNB1P98172 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFNB1P98172 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.45■□□□□ 0.7
EFNB1P98172 AC026471.6-201ENST00000622954 1905 ntBASIC19.45■□□□□ 0.7
EFNB1P98172 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
EFNB1P98172 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
EFNB1P98172 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFNB1P98172 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFNB1P98172 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.45■□□□□ 0.7
EFNB1P98172 AL031602.1-201ENST00000633169 911 ntBASIC19.45■□□□□ 0.7
EFNB1P98172 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFNB1P98172 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
EFNB1P98172 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
EFNB1P98172 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
EFNB1P98172 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFNB1P98172 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFNB1P98172 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
EFNB1P98172 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFNB1P98172 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.44■□□□□ 0.7
EFNB1P98172 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
EFNB1P98172 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFNB1P98172 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
EFNB1P98172 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFNB1P98172 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFNB1P98172 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFNB1P98172 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
EFNB1P98172 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFNB1P98172 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.44■□□□□ 0.7
EFNB1P98172 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.44■□□□□ 0.7
EFNB1P98172 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFNB1P98172 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
EFNB1P98172 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.43■□□□□ 0.7
EFNB1P98172 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFNB1P98172 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
EFNB1P98172 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
EFNB1P98172 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.43■□□□□ 0.7
EFNB1P98172 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.43■□□□□ 0.7
EFNB1P98172 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFNB1P98172 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFNB1P98172 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.43■□□□□ 0.7
EFNB1P98172 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
EFNB1P98172 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
EFNB1P98172 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
EFNB1P98172 BX664725.1-201ENST00000438252 379 ntBASIC19.42■□□□□ 0.7
EFNB1P98172 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.42■□□□□ 0.7
EFNB1P98172 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
EFNB1P98172 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNB1P98172 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
EFNB1P98172 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.41■□□□□ 0.7
EFNB1P98172 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNB1P98172 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNB1P98172 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EFNB1P98172 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EFNB1P98172 AC079089.2-201ENST00000531211 1277 ntBASIC19.41■□□□□ 0.7
EFNB1P98172 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNB1P98172 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
EFNB1P98172 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
EFNB1P98172 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
EFNB1P98172 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNB1P98172 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNB1P98172 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
EFNB1P98172 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
EFNB1P98172 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.4■□□□□ 0.7
EFNB1P98172 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EFNB1P98172 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.4■□□□□ 0.7
EFNB1P98172 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
EFNB1P98172 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.4■□□□□ 0.7
EFNB1P98172 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNB1P98172 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNB1P98172 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.4■□□□□ 0.7
EFNB1P98172 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.4■□□□□ 0.7
EFNB1P98172 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
EFNB1P98172 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.4■□□□□ 0.7
EFNB1P98172 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNB1P98172 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNB1P98172 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNB1P98172 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
EFNB1P98172 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
EFNB1P98172 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.4■□□□□ 0.7
EFNB1P98172 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.39■□□□□ 0.7
EFNB1P98172 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNB1P98172 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.39■□□□□ 0.69
EFNB1P98172 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNB1P98172 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNB1P98172 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.39■□□□□ 0.69
EFNB1P98172 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.39■□□□□ 0.69
EFNB1P98172 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNB1P98172 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNB1P98172 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNB1P98172 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
EFNB1P98172 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNB1P98172 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNB1P98172 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
EFNB1P98172 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
EFNB1P98172 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms