Protein–RNA interactions for Protein: P82673

MRPS35, 28S ribosomal protein S35, mitochondrial, humanhuman

Known RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35P82673 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRPS35P82673 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
MRPS35P82673 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
MRPS35P82673 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
MRPS35P82673 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRPS35P82673 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRPS35P82673 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
MRPS35P82673 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
MRPS35P82673 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
MRPS35P82673 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MRPS35P82673 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MRPS35P82673 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.16■□□□□ 0.98
MRPS35P82673 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
MRPS35P82673 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
MRPS35P82673 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.16■□□□□ 0.98
MRPS35P82673 AC005703.6-201ENST00000623265 1329 ntBASIC21.16■□□□□ 0.98
MRPS35P82673 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.16■□□□□ 0.98
MRPS35P82673 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.16■□□□□ 0.98
MRPS35P82673 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.16■□□□□ 0.98
MRPS35P82673 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.16■□□□□ 0.98
MRPS35P82673 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MRPS35P82673 AF106564.1-201ENST00000607058 2553 ntBASIC21.16■□□□□ 0.98
MRPS35P82673 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
MRPS35P82673 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.15■□□□□ 0.98
MRPS35P82673 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
MRPS35P82673 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRPS35P82673 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
MRPS35P82673 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRPS35P82673 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
MRPS35P82673 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.15■□□□□ 0.98
MRPS35P82673 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRPS35P82673 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.15■□□□□ 0.98
MRPS35P82673 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRPS35P82673 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.15■□□□□ 0.98
MRPS35P82673 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
MRPS35P82673 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.15■□□□□ 0.98
MRPS35P82673 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.15■□□□□ 0.98
MRPS35P82673 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRPS35P82673 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
MRPS35P82673 AC139530.1-201ENST00000575312 1977 ntBASIC21.15■□□□□ 0.98
MRPS35P82673 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
MRPS35P82673 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
MRPS35P82673 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
MRPS35P82673 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
MRPS35P82673 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
MRPS35P82673 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.14■□□□□ 0.98
MRPS35P82673 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
MRPS35P82673 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MRPS35P82673 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.14■□□□□ 0.97
MRPS35P82673 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MRPS35P82673 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MRPS35P82673 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MRPS35P82673 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
MRPS35P82673 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
MRPS35P82673 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MRPS35P82673 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.14■□□□□ 0.97
MRPS35P82673 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
MRPS35P82673 LINC01521-201ENST00000504184 1943 ntBASIC21.14■□□□□ 0.97
MRPS35P82673 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
MRPS35P82673 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.13■□□□□ 0.97
MRPS35P82673 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MRPS35P82673 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MRPS35P82673 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
MRPS35P82673 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.13■□□□□ 0.97
MRPS35P82673 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MRPS35P82673 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MRPS35P82673 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
MRPS35P82673 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
MRPS35P82673 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
MRPS35P82673 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
MRPS35P82673 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
MRPS35P82673 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.12■□□□□ 0.97
MRPS35P82673 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 KRT16P3-201ENST00000439127 1283 ntBASIC21.12■□□□□ 0.97
MRPS35P82673 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
MRPS35P82673 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
MRPS35P82673 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MRPS35P82673 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MRPS35P82673 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
MRPS35P82673 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MRPS35P82673 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
MRPS35P82673 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
MRPS35P82673 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
MRPS35P82673 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
MRPS35P82673 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.11■□□□□ 0.97
MRPS35P82673 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms