Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 KRT18P14-201ENST00000534205 1250 ntBASIC19.02■□□□□ 0.64
NKX6-1P78426 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
NKX6-1P78426 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.64
NKX6-1P78426 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX6-1P78426 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NKX6-1P78426 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.02■□□□□ 0.63
NKX6-1P78426 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
NKX6-1P78426 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.01■□□□□ 0.63
NKX6-1P78426 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
NKX6-1P78426 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX6-1P78426 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.01■□□□□ 0.63
NKX6-1P78426 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX6-1P78426 AC004687.1-201ENST00000579003 1625 ntBASIC19.01■□□□□ 0.63
NKX6-1P78426 HLA-L-209ENST00000420110 1011 ntBASIC19.01■□□□□ 0.63
NKX6-1P78426 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
NKX6-1P78426 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX6-1P78426 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX6-1P78426 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
NKX6-1P78426 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19■□□□□ 0.63
NKX6-1P78426 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
NKX6-1P78426 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
NKX6-1P78426 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
NKX6-1P78426 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NKX6-1P78426 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
NKX6-1P78426 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19■□□□□ 0.63
NKX6-1P78426 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
NKX6-1P78426 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NKX6-1P78426 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19■□□□□ 0.63
NKX6-1P78426 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19■□□□□ 0.63
NKX6-1P78426 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19■□□□□ 0.63
NKX6-1P78426 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19■□□□□ 0.63
NKX6-1P78426 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19■□□□□ 0.63
NKX6-1P78426 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19■□□□□ 0.63
NKX6-1P78426 LINC02228-203ENST00000641970 1355 ntBASIC19■□□□□ 0.63
NKX6-1P78426 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19■□□□□ 0.63
NKX6-1P78426 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NKX6-1P78426 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19■□□□□ 0.63
NKX6-1P78426 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
NKX6-1P78426 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19■□□□□ 0.63
NKX6-1P78426 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19■□□□□ 0.63
NKX6-1P78426 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
NKX6-1P78426 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
NKX6-1P78426 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19■□□□□ 0.63
NKX6-1P78426 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
NKX6-1P78426 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NKX6-1P78426 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
NKX6-1P78426 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.99■□□□□ 0.63
NKX6-1P78426 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NKX6-1P78426 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
NKX6-1P78426 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
NKX6-1P78426 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC18.99■□□□□ 0.63
NKX6-1P78426 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
NKX6-1P78426 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.99■□□□□ 0.63
NKX6-1P78426 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
NKX6-1P78426 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NKX6-1P78426 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
NKX6-1P78426 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
NKX6-1P78426 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.98■□□□□ 0.63
NKX6-1P78426 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-1P78426 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.98■□□□□ 0.63
NKX6-1P78426 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.98■□□□□ 0.63
NKX6-1P78426 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.98■□□□□ 0.63
NKX6-1P78426 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
NKX6-1P78426 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-1P78426 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-1P78426 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-1P78426 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-1P78426 DUSP8P3-201ENST00000399571 1760 ntBASIC18.98■□□□□ 0.63
NKX6-1P78426 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-1P78426 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-1P78426 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
NKX6-1P78426 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NKX6-1P78426 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX6-1P78426 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
NKX6-1P78426 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC18.97■□□□□ 0.63
NKX6-1P78426 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX6-1P78426 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NKX6-1P78426 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX6-1P78426 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX6-1P78426 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
NKX6-1P78426 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.97■□□□□ 0.63
NKX6-1P78426 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
NKX6-1P78426 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.97■□□□□ 0.63
NKX6-1P78426 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.97■□□□□ 0.63
NKX6-1P78426 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
NKX6-1P78426 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX6-1P78426 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX6-1P78426 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX6-1P78426 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX6-1P78426 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX6-1P78426 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
NKX6-1P78426 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
NKX6-1P78426 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKX6-1P78426 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
NKX6-1P78426 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX6-1P78426 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NKX6-1P78426 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.96■□□□□ 0.63
NKX6-1P78426 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX6-1P78426 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NKX6-1P78426 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms