Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEC61A1P61619 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SEC61A1P61619 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SEC61A1P61619 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEC61A1P61619 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.84■□□□□ 0.61
SEC61A1P61619 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEC61A1P61619 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEC61A1P61619 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEC61A1P61619 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SEC61A1P61619 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SEC61A1P61619 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SEC61A1P61619 AC092667.1-201ENST00000434301 2586 ntBASIC18.84■□□□□ 0.61
SEC61A1P61619 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SEC61A1P61619 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
SEC61A1P61619 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SEC61A1P61619 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SEC61A1P61619 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
SEC61A1P61619 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SEC61A1P61619 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEC61A1P61619 UNC93B3-201ENST00000308076 687 ntBASIC18.83■□□□□ 0.6
SEC61A1P61619 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.83■□□□□ 0.6
SEC61A1P61619 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC18.83■□□□□ 0.6
SEC61A1P61619 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SEC61A1P61619 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SEC61A1P61619 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SEC61A1P61619 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SEC61A1P61619 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC61A1P61619 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SEC61A1P61619 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SEC61A1P61619 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC61A1P61619 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC61A1P61619 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC61A1P61619 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.82■□□□□ 0.6
SEC61A1P61619 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC61A1P61619 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SEC61A1P61619 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEC61A1P61619 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SEC61A1P61619 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
SEC61A1P61619 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC61A1P61619 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC61A1P61619 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SEC61A1P61619 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SEC61A1P61619 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.82■□□□□ 0.6
SEC61A1P61619 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.82■□□□□ 0.6
SEC61A1P61619 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SEC61A1P61619 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC61A1P61619 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SEC61A1P61619 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
SEC61A1P61619 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC61A1P61619 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SEC61A1P61619 ESRRAP2-201ENST00000418437 1549 ntBASIC18.81■□□□□ 0.6
SEC61A1P61619 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC61A1P61619 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC61A1P61619 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.81■□□□□ 0.6
SEC61A1P61619 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.81■□□□□ 0.6
SEC61A1P61619 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SEC61A1P61619 C17orf82-201ENST00000623772 1530 ntBASIC18.8■□□□□ 0.6
SEC61A1P61619 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC61A1P61619 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC61A1P61619 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.8■□□□□ 0.6
SEC61A1P61619 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC61A1P61619 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC61A1P61619 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.8■□□□□ 0.6
SEC61A1P61619 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC61A1P61619 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC61A1P61619 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEC61A1P61619 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.8■□□□□ 0.6
SEC61A1P61619 PBX2P1-201ENST00000493219 1291 ntBASIC18.8■□□□□ 0.6
SEC61A1P61619 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEC61A1P61619 AC099791.2-201ENST00000605725 427 ntBASIC18.8■□□□□ 0.6
SEC61A1P61619 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC61A1P61619 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SEC61A1P61619 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.8■□□□□ 0.6
SEC61A1P61619 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
SEC61A1P61619 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SEC61A1P61619 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC61A1P61619 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SEC61A1P61619 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.8■□□□□ 0.6
SEC61A1P61619 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC61A1P61619 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SEC61A1P61619 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC61A1P61619 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC61A1P61619 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC61A1P61619 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.79■□□□□ 0.6
SEC61A1P61619 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC61A1P61619 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SEC61A1P61619 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SEC61A1P61619 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SEC61A1P61619 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.79■□□□□ 0.6
SEC61A1P61619 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEC61A1P61619 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEC61A1P61619 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.79■□□□□ 0.6
SEC61A1P61619 AL136162.1-201ENST00000607711 1078 ntBASIC18.79■□□□□ 0.6
SEC61A1P61619 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEC61A1P61619 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.79■□□□□ 0.6
SEC61A1P61619 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SEC61A1P61619 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.79■□□□□ 0.6
SEC61A1P61619 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.79■□□□□ 0.6
SEC61A1P61619 FBXW4P1-201ENST00000426721 2239 ntBASIC18.78■□□□□ 0.6
SEC61A1P61619 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms