Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
DEFA3P59666 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
DEFA3P59666 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.02■□□□□ 0.64
DEFA3P59666 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
DEFA3P59666 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
DEFA3P59666 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DEFA3P59666 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
DEFA3P59666 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DEFA3P59666 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.02■□□□□ 0.64
DEFA3P59666 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
DEFA3P59666 AL022069.1-201ENST00000568025 1636 ntBASIC19.02■□□□□ 0.64
DEFA3P59666 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
DEFA3P59666 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
DEFA3P59666 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
DEFA3P59666 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.02■□□□□ 0.63
DEFA3P59666 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
DEFA3P59666 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DEFA3P59666 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.02■□□□□ 0.63
DEFA3P59666 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
DEFA3P59666 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DEFA3P59666 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
DEFA3P59666 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
DEFA3P59666 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
DEFA3P59666 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
DEFA3P59666 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.01■□□□□ 0.63
DEFA3P59666 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.01■□□□□ 0.63
DEFA3P59666 ALDH1A3-203ENST00000557963 1670 ntBASIC19.01■□□□□ 0.63
DEFA3P59666 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
DEFA3P59666 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DEFA3P59666 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
DEFA3P59666 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DEFA3P59666 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
DEFA3P59666 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DEFA3P59666 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DEFA3P59666 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.01■□□□□ 0.63
DEFA3P59666 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
DEFA3P59666 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
DEFA3P59666 PFN2-211ENST00000489155 636 ntTSL 4 BASIC19.01■□□□□ 0.63
DEFA3P59666 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
DEFA3P59666 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
DEFA3P59666 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DEFA3P59666 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
DEFA3P59666 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
DEFA3P59666 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.01■□□□□ 0.63
DEFA3P59666 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.01■□□□□ 0.63
DEFA3P59666 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.01■□□□□ 0.63
DEFA3P59666 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
DEFA3P59666 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DEFA3P59666 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19■□□□□ 0.63
DEFA3P59666 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19■□□□□ 0.63
DEFA3P59666 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DEFA3P59666 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
DEFA3P59666 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19■□□□□ 0.63
DEFA3P59666 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19■□□□□ 0.63
DEFA3P59666 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19■□□□□ 0.63
DEFA3P59666 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19■□□□□ 0.63
DEFA3P59666 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
DEFA3P59666 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DEFA3P59666 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.99■□□□□ 0.63
DEFA3P59666 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC18.99■□□□□ 0.63
DEFA3P59666 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DEFA3P59666 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.99■□□□□ 0.63
DEFA3P59666 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DEFA3P59666 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DEFA3P59666 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DEFA3P59666 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.99■□□□□ 0.63
DEFA3P59666 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DEFA3P59666 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DEFA3P59666 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DEFA3P59666 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.99■□□□□ 0.63
DEFA3P59666 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DEFA3P59666 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DEFA3P59666 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
DEFA3P59666 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
DEFA3P59666 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DEFA3P59666 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
DEFA3P59666 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DEFA3P59666 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
DEFA3P59666 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DEFA3P59666 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DEFA3P59666 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DEFA3P59666 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DEFA3P59666 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
DEFA3P59666 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
DEFA3P59666 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DEFA3P59666 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
DEFA3P59666 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DEFA3P59666 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
DEFA3P59666 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
DEFA3P59666 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.97■□□□□ 0.63
DEFA3P59666 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.97■□□□□ 0.63
DEFA3P59666 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DEFA3P59666 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.97■□□□□ 0.63
DEFA3P59666 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
DEFA3P59666 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DEFA3P59666 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DEFA3P59666 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DEFA3P59666 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
DEFA3P59666 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC18.97■□□□□ 0.63
DEFA3P59666 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms