Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN20P56880 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN20P56880 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN20P56880 AC126544.1-201ENST00000580842 1059 ntBASIC19.83■□□□□ 0.77
CLDN20P56880 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN20P56880 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN20P56880 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN20P56880 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CLDN20P56880 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
CLDN20P56880 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.82■□□□□ 0.76
CLDN20P56880 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN20P56880 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN20P56880 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.82■□□□□ 0.76
CLDN20P56880 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN20P56880 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN20P56880 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.82■□□□□ 0.76
CLDN20P56880 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLDN20P56880 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN20P56880 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN20P56880 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN20P56880 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLDN20P56880 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CLDN20P56880 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN20P56880 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN20P56880 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN20P56880 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN20P56880 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN20P56880 AL137060.1-201ENST00000618151 2648 ntBASIC19.81■□□□□ 0.76
CLDN20P56880 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN20P56880 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLDN20P56880 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN20P56880 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN20P56880 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLDN20P56880 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLDN20P56880 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN20P56880 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLDN20P56880 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDN20P56880 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CLDN20P56880 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN20P56880 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN20P56880 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CLDN20P56880 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN20P56880 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN20P56880 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CLDN20P56880 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN20P56880 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.8■□□□□ 0.76
CLDN20P56880 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN20P56880 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CLDN20P56880 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN20P56880 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN20P56880 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CLDN20P56880 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CLDN20P56880 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN20P56880 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLDN20P56880 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN20P56880 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN20P56880 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN20P56880 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN20P56880 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CLDN20P56880 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN20P56880 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN20P56880 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN20P56880 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN20P56880 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN20P56880 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN20P56880 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN20P56880 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN20P56880 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN20P56880 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN20P56880 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN20P56880 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN20P56880 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN20P56880 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN20P56880 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN20P56880 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN20P56880 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN20P56880 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN20P56880 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN20P56880 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN20P56880 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN20P56880 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLDN20P56880 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLDN20P56880 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN20P56880 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN20P56880 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN20P56880 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLDN20P56880 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN20P56880 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN20P56880 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
CLDN20P56880 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
CLDN20P56880 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.77■□□□□ 0.75
CLDN20P56880 TSPY26P-201ENST00000476365 1326 ntBASIC19.76■□□□□ 0.75
CLDN20P56880 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN20P56880 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN20P56880 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN20P56880 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
CLDN20P56880 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN20P56880 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN20P56880 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.76■□□□□ 0.75
CLDN20P56880 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms