Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
WNT3AP56704 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
WNT3AP56704 AC008764.7-201ENST00000593779 1081 ntBASIC21.95■■□□□ 1.1
WNT3AP56704 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.95■■□□□ 1.1
WNT3AP56704 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
WNT3AP56704 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
WNT3AP56704 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.95■■□□□ 1.1
WNT3AP56704 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
WNT3AP56704 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
WNT3AP56704 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.94■■□□□ 1.1
WNT3AP56704 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
WNT3AP56704 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
WNT3AP56704 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
WNT3AP56704 EDA-201ENST00000338901 1233 ntBASIC21.94■■□□□ 1.1
WNT3AP56704 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.94■■□□□ 1.1
WNT3AP56704 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.94■■□□□ 1.1
WNT3AP56704 AL139246.5-201ENST00000606645 996 ntBASIC21.94■■□□□ 1.1
WNT3AP56704 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
WNT3AP56704 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.94■■□□□ 1.1
WNT3AP56704 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
WNT3AP56704 OXCT2P1-201ENST00000447263 1535 ntBASIC21.94■■□□□ 1.1
WNT3AP56704 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
WNT3AP56704 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
WNT3AP56704 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.94■■□□□ 1.1
WNT3AP56704 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.94■■□□□ 1.1
WNT3AP56704 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
WNT3AP56704 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
WNT3AP56704 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
WNT3AP56704 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
WNT3AP56704 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
WNT3AP56704 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.93■■□□□ 1.1
WNT3AP56704 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
WNT3AP56704 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
WNT3AP56704 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
WNT3AP56704 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
WNT3AP56704 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
WNT3AP56704 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
WNT3AP56704 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
WNT3AP56704 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
WNT3AP56704 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
WNT3AP56704 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
WNT3AP56704 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
WNT3AP56704 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.92■■□□□ 1.1
WNT3AP56704 AP001330.3-201ENST00000520123 633 ntBASIC21.92■■□□□ 1.1
WNT3AP56704 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.92■■□□□ 1.1
WNT3AP56704 AC126544.1-201ENST00000580842 1059 ntBASIC21.92■■□□□ 1.1
WNT3AP56704 AL355001.2-201ENST00000620617 1191 ntBASIC21.92■■□□□ 1.1
WNT3AP56704 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
WNT3AP56704 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
WNT3AP56704 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.92■■□□□ 1.1
WNT3AP56704 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
WNT3AP56704 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
WNT3AP56704 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
WNT3AP56704 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
WNT3AP56704 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.91■■□□□ 1.1
WNT3AP56704 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
WNT3AP56704 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.91■■□□□ 1.1
WNT3AP56704 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.91■■□□□ 1.1
WNT3AP56704 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
WNT3AP56704 AC099791.1-201ENST00000416440 715 ntBASIC21.91■■□□□ 1.1
WNT3AP56704 AL031432.3-201ENST00000607698 485 ntBASIC21.91■■□□□ 1.1
WNT3AP56704 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
WNT3AP56704 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.91■■□□□ 1.1
WNT3AP56704 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
WNT3AP56704 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
WNT3AP56704 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
WNT3AP56704 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
WNT3AP56704 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
WNT3AP56704 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
WNT3AP56704 OR7E47P-201ENST00000546390 1422 ntBASIC21.9■■□□□ 1.1
WNT3AP56704 C11orf96-202ENST00000528572 1834 ntBASIC21.9■■□□□ 1.1
WNT3AP56704 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
WNT3AP56704 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
WNT3AP56704 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.9■■□□□ 1.1
WNT3AP56704 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.9■■□□□ 1.1
WNT3AP56704 AC027682.1-201ENST00000562846 899 ntBASIC21.9■■□□□ 1.1
WNT3AP56704 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
WNT3AP56704 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.9■■□□□ 1.1
WNT3AP56704 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
WNT3AP56704 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.9■■□□□ 1.1
WNT3AP56704 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
WNT3AP56704 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
WNT3AP56704 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
WNT3AP56704 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
WNT3AP56704 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
WNT3AP56704 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
WNT3AP56704 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.89■■□□□ 1.09
WNT3AP56704 AF213884.3-201ENST00000563833 479 ntBASIC21.89■■□□□ 1.09
WNT3AP56704 AC133561.4-201ENST00000566112 224 ntBASIC21.89■■□□□ 1.09
WNT3AP56704 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.89■■□□□ 1.09
WNT3AP56704 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.89■■□□□ 1.09
WNT3AP56704 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
WNT3AP56704 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
WNT3AP56704 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC21.89■■□□□ 1.09
WNT3AP56704 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
WNT3AP56704 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.88■■□□□ 1.09
WNT3AP56704 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
WNT3AP56704 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.88■■□□□ 1.09
WNT3AP56704 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.88■■□□□ 1.09
WNT3AP56704 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms