Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 KRT125P-201ENST00000546827 989 ntBASIC19.05■□□□□ 0.64
CCR9P51686 AC073130.3-201ENST00000624389 2278 ntBASIC19.05■□□□□ 0.64
CCR9P51686 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.05■□□□□ 0.64
CCR9P51686 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCR9P51686 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCR9P51686 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.05■□□□□ 0.64
CCR9P51686 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCR9P51686 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCR9P51686 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCR9P51686 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCR9P51686 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CCR9P51686 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCR9P51686 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCR9P51686 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCR9P51686 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCR9P51686 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCR9P51686 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCR9P51686 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCR9P51686 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.04■□□□□ 0.64
CCR9P51686 MTDHP2-201ENST00000601468 714 ntBASIC19.04■□□□□ 0.64
CCR9P51686 AL499627.2-201ENST00000606283 725 ntBASIC19.04■□□□□ 0.64
CCR9P51686 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.04■□□□□ 0.64
CCR9P51686 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCR9P51686 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.04■□□□□ 0.64
CCR9P51686 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCR9P51686 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCR9P51686 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CCR9P51686 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
CCR9P51686 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCR9P51686 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCR9P51686 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCR9P51686 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCR9P51686 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCR9P51686 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CCR9P51686 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.03■□□□□ 0.64
CCR9P51686 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCR9P51686 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CCR9P51686 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.03■□□□□ 0.64
CCR9P51686 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.03■□□□□ 0.64
CCR9P51686 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCR9P51686 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CCR9P51686 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCR9P51686 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCR9P51686 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCR9P51686 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCR9P51686 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
CCR9P51686 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.02■□□□□ 0.64
CCR9P51686 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCR9P51686 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCR9P51686 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.02■□□□□ 0.64
CCR9P51686 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.02■□□□□ 0.64
CCR9P51686 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCR9P51686 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.02■□□□□ 0.64
CCR9P51686 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCR9P51686 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.02■□□□□ 0.64
CCR9P51686 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCR9P51686 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCR9P51686 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCR9P51686 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCR9P51686 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCR9P51686 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCR9P51686 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
CCR9P51686 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.01■□□□□ 0.63
CCR9P51686 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCR9P51686 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCR9P51686 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CCR9P51686 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCR9P51686 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCR9P51686 AL121603.2-201ENST00000557373 2117 ntBASIC19.01■□□□□ 0.63
CCR9P51686 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCR9P51686 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CCR9P51686 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.01■□□□□ 0.63
CCR9P51686 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
CCR9P51686 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCR9P51686 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
CCR9P51686 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
CCR9P51686 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCR9P51686 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19■□□□□ 0.63
CCR9P51686 HES6-204ENST00000409182 863 ntTSL 2 BASIC19■□□□□ 0.63
CCR9P51686 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CCR9P51686 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCR9P51686 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCR9P51686 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
CCR9P51686 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CCR9P51686 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCR9P51686 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CCR9P51686 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
CCR9P51686 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CCR9P51686 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
CCR9P51686 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCR9P51686 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCR9P51686 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.99■□□□□ 0.63
CCR9P51686 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCR9P51686 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.99■□□□□ 0.63
CCR9P51686 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCR9P51686 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.99■□□□□ 0.63
CCR9P51686 MIR4787-201ENST00000607364 84 ntBASIC18.99■□□□□ 0.63
CCR9P51686 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CCR9P51686 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CCR9P51686 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms