Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.3■■□□□ 1
SLC1A6P48664 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC1A6P48664 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC1A6P48664 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
SLC1A6P48664 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC1A6P48664 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
SLC1A6P48664 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
SLC1A6P48664 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC1A6P48664 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.3■■□□□ 1
SLC1A6P48664 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.3■■□□□ 1
SLC1A6P48664 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SLC1A6P48664 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC1A6P48664 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.29■■□□□ 1
SLC1A6P48664 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC1A6P48664 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC1A6P48664 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
SLC1A6P48664 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
SLC1A6P48664 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.29■■□□□ 1
SLC1A6P48664 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.29■■□□□ 1
SLC1A6P48664 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC1A6P48664 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.29■■□□□ 1
SLC1A6P48664 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC1A6P48664 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.29■■□□□ 1
SLC1A6P48664 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.29■■□□□ 1
SLC1A6P48664 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SLC1A6P48664 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.29■■□□□ 1
SLC1A6P48664 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC1A6P48664 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC1A6P48664 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC1A6P48664 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.28■■□□□ 1
SLC1A6P48664 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC1A6P48664 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.28■■□□□ 1
SLC1A6P48664 AC021242.3-201ENST00000607598 1377 ntBASIC21.28■■□□□ 1
SLC1A6P48664 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC1A6P48664 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SLC1A6P48664 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.28■■□□□ 1
SLC1A6P48664 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.28■■□□□ 1
SLC1A6P48664 AC009102.2-201ENST00000606772 1639 ntBASIC21.28■■□□□ 1
SLC1A6P48664 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.28■■□□□ 1
SLC1A6P48664 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC1A6P48664 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SLC1A6P48664 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.28■■□□□ 1
SLC1A6P48664 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SLC1A6P48664 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.28■■□□□ 1
SLC1A6P48664 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
SLC1A6P48664 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC1A6P48664 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC1A6P48664 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SLC1A6P48664 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.27■■□□□ 1
SLC1A6P48664 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.27■■□□□ 1
SLC1A6P48664 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
SLC1A6P48664 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.27■■□□□ 1
SLC1A6P48664 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.27■■□□□ 1
SLC1A6P48664 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
SLC1A6P48664 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.27■□□□□ 0.99
SLC1A6P48664 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
SLC1A6P48664 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SLC1A6P48664 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A6P48664 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A6P48664 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SLC1A6P48664 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SLC1A6P48664 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SLC1A6P48664 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC1A6P48664 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A6P48664 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A6P48664 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.26■□□□□ 0.99
SLC1A6P48664 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC1A6P48664 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.26■□□□□ 0.99
SLC1A6P48664 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A6P48664 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A6P48664 FEM1AP4-201ENST00000443167 1987 ntBASIC21.26■□□□□ 0.99
SLC1A6P48664 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A6P48664 AC073130.3-201ENST00000624389 2278 ntBASIC21.26■□□□□ 0.99
SLC1A6P48664 AF106564.1-201ENST00000607058 2553 ntBASIC21.26■□□□□ 0.99
SLC1A6P48664 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A6P48664 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.26■□□□□ 0.99
SLC1A6P48664 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SLC1A6P48664 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SLC1A6P48664 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A6P48664 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
SLC1A6P48664 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC1A6P48664 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A6P48664 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A6P48664 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
SLC1A6P48664 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC1A6P48664 AL031848.2-201ENST00000607670 837 ntBASIC21.25■□□□□ 0.99
SLC1A6P48664 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SLC1A6P48664 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A6P48664 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SLC1A6P48664 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.25■□□□□ 0.99
SLC1A6P48664 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A6P48664 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A6P48664 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.24■□□□□ 0.99
SLC1A6P48664 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A6P48664 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A6P48664 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.24■□□□□ 0.99
SLC1A6P48664 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.24■□□□□ 0.99
SLC1A6P48664 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC1A6P48664 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC1A6P48664 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms