Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.04■□□□□ 0.64
SOX2P48431 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.04■□□□□ 0.64
SOX2P48431 AC005229.4-201ENST00000610085 2198 ntBASIC19.04■□□□□ 0.64
SOX2P48431 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SOX2P48431 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SOX2P48431 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.04■□□□□ 0.64
SOX2P48431 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
SOX2P48431 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.04■□□□□ 0.64
SOX2P48431 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX2P48431 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX2P48431 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.03■□□□□ 0.64
SOX2P48431 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.03■□□□□ 0.64
SOX2P48431 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.03■□□□□ 0.64
SOX2P48431 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX2P48431 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
SOX2P48431 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SOX2P48431 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.03■□□□□ 0.64
SOX2P48431 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SOX2P48431 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SOX2P48431 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.03■□□□□ 0.64
SOX2P48431 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SOX2P48431 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SOX2P48431 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SOX2P48431 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SOX2P48431 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.02■□□□□ 0.64
SOX2P48431 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SOX2P48431 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SOX2P48431 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SOX2P48431 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.02■□□□□ 0.64
SOX2P48431 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
SOX2P48431 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SOX2P48431 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SOX2P48431 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.02■□□□□ 0.64
SOX2P48431 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SOX2P48431 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
SOX2P48431 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SOX2P48431 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.02■□□□□ 0.63
SOX2P48431 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.01■□□□□ 0.63
SOX2P48431 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX2P48431 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX2P48431 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.01■□□□□ 0.63
SOX2P48431 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX2P48431 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SOX2P48431 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX2P48431 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.01■□□□□ 0.63
SOX2P48431 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX2P48431 AC021242.3-201ENST00000607598 1377 ntBASIC19.01■□□□□ 0.63
SOX2P48431 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.01■□□□□ 0.63
SOX2P48431 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SOX2P48431 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SOX2P48431 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SOX2P48431 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
SOX2P48431 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.01■□□□□ 0.63
SOX2P48431 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
SOX2P48431 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SOX2P48431 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19■□□□□ 0.63
SOX2P48431 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SOX2P48431 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SOX2P48431 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SOX2P48431 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19■□□□□ 0.63
SOX2P48431 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SOX2P48431 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19■□□□□ 0.63
SOX2P48431 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SOX2P48431 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SOX2P48431 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SOX2P48431 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SOX2P48431 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SOX2P48431 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19■□□□□ 0.63
SOX2P48431 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX2P48431 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX2P48431 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.99■□□□□ 0.63
SOX2P48431 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX2P48431 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.99■□□□□ 0.63
SOX2P48431 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.99■□□□□ 0.63
SOX2P48431 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX2P48431 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX2P48431 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.99■□□□□ 0.63
SOX2P48431 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.99■□□□□ 0.63
SOX2P48431 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX2P48431 BX664725.1-201ENST00000438252 379 ntBASIC18.99■□□□□ 0.63
SOX2P48431 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.99■□□□□ 0.63
SOX2P48431 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.99■□□□□ 0.63
SOX2P48431 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.99■□□□□ 0.63
SOX2P48431 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.99■□□□□ 0.63
SOX2P48431 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
SOX2P48431 AC009102.2-201ENST00000606772 1639 ntBASIC18.99■□□□□ 0.63
SOX2P48431 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SOX2P48431 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX2P48431 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX2P48431 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SOX2P48431 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX2P48431 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.98■□□□□ 0.63
SOX2P48431 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.98■□□□□ 0.63
SOX2P48431 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX2P48431 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SOX2P48431 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SOX2P48431 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.98■□□□□ 0.63
SOX2P48431 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX2P48431 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SOX2P48431 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms