Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EPHA3P29320 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
EPHA3P29320 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
EPHA3P29320 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
EPHA3P29320 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.07■□□□□ 0.96
EPHA3P29320 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
EPHA3P29320 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
EPHA3P29320 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.07■□□□□ 0.96
EPHA3P29320 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHA3P29320 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHA3P29320 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHA3P29320 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHA3P29320 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHA3P29320 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
EPHA3P29320 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.06■□□□□ 0.96
EPHA3P29320 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
EPHA3P29320 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.06■□□□□ 0.96
EPHA3P29320 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHA3P29320 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHA3P29320 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.06■□□□□ 0.96
EPHA3P29320 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.06■□□□□ 0.96
EPHA3P29320 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EPHA3P29320 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
EPHA3P29320 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.06■□□□□ 0.96
EPHA3P29320 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
EPHA3P29320 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHA3P29320 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
EPHA3P29320 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHA3P29320 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EPHA3P29320 Z98882.1-201ENST00000622160 2253 ntBASIC21.06■□□□□ 0.96
EPHA3P29320 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHA3P29320 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.05■□□□□ 0.96
EPHA3P29320 AF106564.1-201ENST00000607058 2553 ntBASIC21.05■□□□□ 0.96
EPHA3P29320 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
EPHA3P29320 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.05■□□□□ 0.96
EPHA3P29320 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EPHA3P29320 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.05■□□□□ 0.96
EPHA3P29320 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EPHA3P29320 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA3P29320 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA3P29320 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA3P29320 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.04■□□□□ 0.96
EPHA3P29320 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
EPHA3P29320 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.04■□□□□ 0.96
EPHA3P29320 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA3P29320 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
EPHA3P29320 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA3P29320 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA3P29320 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA3P29320 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA3P29320 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EPHA3P29320 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
EPHA3P29320 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.04■□□□□ 0.96
EPHA3P29320 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.04■□□□□ 0.96
EPHA3P29320 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHA3P29320 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHA3P29320 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHA3P29320 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHA3P29320 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EPHA3P29320 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHA3P29320 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
EPHA3P29320 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EPHA3P29320 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.03■□□□□ 0.96
EPHA3P29320 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.03■□□□□ 0.96
EPHA3P29320 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.03■□□□□ 0.96
EPHA3P29320 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.03■□□□□ 0.96
EPHA3P29320 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EPHA3P29320 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
EPHA3P29320 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHA3P29320 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
EPHA3P29320 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHA3P29320 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
EPHA3P29320 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC21.02■□□□□ 0.96
EPHA3P29320 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EPHA3P29320 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
EPHA3P29320 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.02■□□□□ 0.96
EPHA3P29320 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHA3P29320 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHA3P29320 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EPHA3P29320 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
EPHA3P29320 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EPHA3P29320 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
EPHA3P29320 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.02■□□□□ 0.95
EPHA3P29320 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EPHA3P29320 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.01■□□□□ 0.95
EPHA3P29320 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.01■□□□□ 0.95
EPHA3P29320 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.01■□□□□ 0.95
EPHA3P29320 AC073130.3-201ENST00000624389 2278 ntBASIC21.01■□□□□ 0.95
EPHA3P29320 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.01■□□□□ 0.95
EPHA3P29320 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
EPHA3P29320 BX664725.1-201ENST00000438252 379 ntBASIC21.01■□□□□ 0.95
EPHA3P29320 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EPHA3P29320 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EPHA3P29320 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
EPHA3P29320 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
EPHA3P29320 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.01■□□□□ 0.95
EPHA3P29320 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
EPHA3P29320 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21■□□□□ 0.95
EPHA3P29320 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
EPHA3P29320 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms