Protein–RNA interactions for Protein: P25846

MSH1, DNA mismatch repair protein MSH1, mitochondrial, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH1P25846 RGS2YOR107W 930 nt4.47□□□□□ -1.69
MSH1P25846 YPR174CYPR174C 666 nt4.47□□□□□ -1.69
MSH1P25846 PLM2YDR501W 1566 nt4.47□□□□□ -1.69
MSH1P25846 ULS1YOR191W 4860 nt4.47□□□□□ -1.69
MSH1P25846 NOP58YOR310C 1536 nt4.46□□□□□ -1.69
MSH1P25846 YLR152CYLR152C 1731 nt4.46□□□□□ -1.69
MSH1P25846 SLS1YLR139C 1932 nt4.46□□□□□ -1.69
MSH1P25846 NCR1YPL006W 3513 nt4.46□□□□□ -1.69
MSH1P25846 YER077CYER077C 2067 nt4.46□□□□□ -1.7
MSH1P25846 MSN4YKL062W 1893 nt4.46□□□□□ -1.7
MSH1P25846 APN2YBL019W 1563 nt4.46□□□□□ -1.7
MSH1P25846 TRM12YML005W 1389 nt4.46□□□□□ -1.7
MSH1P25846 YDL094CYDL094C 510 nt4.46□□□□□ -1.7
MSH1P25846 RUF21RUF21 707 nt4.46□□□□□ -1.7
MSH1P25846 HAT1YPL001W 1125 nt4.46□□□□□ -1.7
MSH1P25846 YPR071WYPR071W 636 nt4.46□□□□□ -1.7
MSH1P25846 SPT23YKL020C 3249 nt4.46□□□□□ -1.7
MSH1P25846 ALR2YFL050C 2577 nt4.46□□□□□ -1.7
MSH1P25846 STD1YOR047C 1335 nt4.46□□□□□ -1.7
MSH1P25846 YML020WYML020W 1995 nt4.45□□□□□ -1.7
MSH1P25846 RDH54YBR073W 2877 nt4.45□□□□□ -1.7
MSH1P25846 NUG1YER006W 1563 nt4.45□□□□□ -1.7
MSH1P25846 RXT3YDL076C 885 nt4.45□□□□□ -1.7
MSH1P25846 ERG25YGR060W 930 nt4.45□□□□□ -1.7
MSH1P25846 PFS1YHR185C 714 nt4.45□□□□□ -1.7
MSH1P25846 IRC9YJL142C 393 nt4.45□□□□□ -1.7
MSH1P25846 YLR407WYLR407W 687 nt4.45□□□□□ -1.7
MSH1P25846 POP3YNL282W 588 nt4.45□□□□□ -1.7
MSH1P25846 YOR062CYOR062C 807 nt4.45□□□□□ -1.7
MSH1P25846 HSH49YOR319W 642 nt4.45□□□□□ -1.7
MSH1P25846 MET17YLR303W 1335 nt4.45□□□□□ -1.7
MSH1P25846 CET1YPL228W 1650 nt4.45□□□□□ -1.7
MSH1P25846 NAM2YLR382C 2685 nt4.44□□□□□ -1.7
MSH1P25846 SWI1YPL016W 3945 nt4.44□□□□□ -1.7
MSH1P25846 ATG2YNL242W 4779 nt4.44□□□□□ -1.7
MSH1P25846 YDR509WYDR509W 348 nt4.44□□□□□ -1.7
MSH1P25846 SPT15YER148W 723 nt4.44□□□□□ -1.7
MSH1P25846 RPL24AYGL031C 468 nt4.44□□□□□ -1.7
MSH1P25846 YGR111WYGR111W 1203 nt4.44□□□□□ -1.7
MSH1P25846 YHR173CYHR173C 339 nt4.44□□□□□ -1.7
MSH1P25846 YLR307C-AYLR307C-A 264 nt4.44□□□□□ -1.7
MSH1P25846 RPS19AYOL121C 435 nt4.44□□□□□ -1.7
MSH1P25846 PFK27YOL136C 1194 nt4.44□□□□□ -1.7
MSH1P25846 RPB8YOR224C 441 nt4.44□□□□□ -1.7
MSH1P25846 PEP4YPL154C 1218 nt4.44□□□□□ -1.7
MSH1P25846 NTH1YDR001C 2256 nt4.44□□□□□ -1.7
MSH1P25846 ALG1YBR110W 1350 nt4.43□□□□□ -1.7
MSH1P25846 SIP1YDR422C 2448 nt4.43□□□□□ -1.7
MSH1P25846 YCR100CYCR100C 951 nt4.43□□□□□ -1.7
MSH1P25846 PTA1YAL043C 2358 nt4.43□□□□□ -1.7
MSH1P25846 CEX1YOR112W 2286 nt4.43□□□□□ -1.7
MSH1P25846 LAS1YKR063C 1509 nt4.42□□□□□ -1.7
MSH1P25846 HAT2YEL056W 1206 nt4.42□□□□□ -1.7
MSH1P25846 SPO73YER046W 432 nt4.42□□□□□ -1.7
MSH1P25846 MPS2YGL075C 1164 nt4.42□□□□□ -1.7
MSH1P25846 Q0255Q0255 1419 nt4.42□□□□□ -1.7
MSH1P25846 SMD3YLR147C 306 nt4.42□□□□□ -1.7
MSH1P25846 CIN5YOR028C 888 nt4.42□□□□□ -1.7
MSH1P25846 CAF20YOR276W 486 nt4.42□□□□□ -1.7
MSH1P25846 TYE7YOR344C 876 nt4.42□□□□□ -1.7
MSH1P25846 ECM23YPL021W 564 nt4.42□□□□□ -1.7
MSH1P25846 GDT1YBR187W 843 nt4.42□□□□□ -1.7
MSH1P25846 SAD1YFR005C 1347 nt4.42□□□□□ -1.7
MSH1P25846 SSM4YIL030C 3960 nt4.42□□□□□ -1.7
MSH1P25846 ART10YLR392C 1557 nt4.41□□□□□ -1.7
MSH1P25846 TPD3YAL016W 1908 nt4.41□□□□□ -1.7
MSH1P25846 GRX3YDR098C 858 nt4.41□□□□□ -1.7
MSH1P25846 YDR355CYDR355C 303 nt4.41□□□□□ -1.7
MSH1P25846 PSF2YJL072C 642 nt4.41□□□□□ -1.7
MSH1P25846 YNK1YKL067W 462 nt4.41□□□□□ -1.7
MSH1P25846 GPN3YLR243W 819 nt4.41□□□□□ -1.7
MSH1P25846 YLR364C-AYLR364C-A 123 nt4.41□□□□□ -1.7
MSH1P25846 MED11YMR112C 396 nt4.41□□□□□ -1.7
MSH1P25846 DUG3YNL191W 1074 nt4.41□□□□□ -1.7
MSH1P25846 UTP23YOR004W 765 nt4.41□□□□□ -1.7
MSH1P25846 THI80YOR143C 960 nt4.41□□□□□ -1.7
MSH1P25846 YOR186WYOR186W 435 nt4.41□□□□□ -1.7
MSH1P25846 TIF5YPR041W 1218 nt4.41□□□□□ -1.7
MSH1P25846 MRPL51YPR100W 423 nt4.41□□□□□ -1.7
MSH1P25846 YCL022CYCL022C 516 nt4.41□□□□□ -1.7
MSH1P25846 ROK1YGL171W 1695 nt4.41□□□□□ -1.7
MSH1P25846 BIK1YCL029C 1323 nt4.41□□□□□ -1.7
MSH1P25846 MLH2YLR035C 2088 nt4.41□□□□□ -1.7
MSH1P25846 RTA1YGR213C 954 nt4.4□□□□□ -1.71
MSH1P25846 YGR283CYGR283C 1026 nt4.4□□□□□ -1.71
MSH1P25846 YIL156W-AYIL156W-A 402 nt4.4□□□□□ -1.71
MSH1P25846 RDN5-1RDN5-1 121 nt4.4□□□□□ -1.71
MSH1P25846 YKR070WYKR070W 1059 nt4.4□□□□□ -1.71
MSH1P25846 RDN5-6RDN5-6 121 nt4.4□□□□□ -1.71
MSH1P25846 RPS11BYBR048W 471 nt4.4□□□□□ -1.71
MSH1P25846 YBR096WYBR096W 693 nt4.4□□□□□ -1.71
MSH1P25846 DPH6YLR143W 2058 nt4.4□□□□□ -1.71
MSH1P25846 MTH1YDR277C 1302 nt4.4□□□□□ -1.71
MSH1P25846 FLC1YPL221W 2382 nt4.4□□□□□ -1.71
MSH1P25846 YEH2YLR020C 1617 nt4.39□□□□□ -1.71
MSH1P25846 HOS3YPL116W 2094 nt4.39□□□□□ -1.71
MSH1P25846 RPB2YOR151C 3675 nt4.39□□□□□ -1.71
MSH1P25846 YJR061WYJR061W 2808 nt4.39□□□□□ -1.71
MSH1P25846 IZH1YDR492W 951 nt4.39□□□□□ -1.71
MSH1P25846 YFL051CYFL051C 483 nt4.39□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 26 ms