Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MMP11P24347 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.58■□□□□ 0.89
MMP11P24347 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.58■□□□□ 0.89
MMP11P24347 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.58■□□□□ 0.89
MMP11P24347 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.58■□□□□ 0.89
MMP11P24347 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC20.58■□□□□ 0.89
MMP11P24347 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
MMP11P24347 AC105233.4-201ENST00000642045 216 ntBASIC20.58■□□□□ 0.89
MMP11P24347 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MMP11P24347 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
MMP11P24347 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MMP11P24347 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MMP11P24347 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP11P24347 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MMP11P24347 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MMP11P24347 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP11P24347 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP11P24347 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.57■□□□□ 0.88
MMP11P24347 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
MMP11P24347 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.57■□□□□ 0.88
MMP11P24347 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.57■□□□□ 0.88
MMP11P24347 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.57■□□□□ 0.88
MMP11P24347 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP11P24347 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MMP11P24347 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.57■□□□□ 0.88
MMP11P24347 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP11P24347 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MMP11P24347 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP11P24347 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP11P24347 LINC00526-201ENST00000581067 1875 ntBASIC20.56■□□□□ 0.88
MMP11P24347 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP11P24347 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MMP11P24347 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MMP11P24347 DUX4L2-201ENST00000561772 1275 ntBASIC20.56■□□□□ 0.88
MMP11P24347 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.56■□□□□ 0.88
MMP11P24347 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.56■□□□□ 0.88
MMP11P24347 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.56■□□□□ 0.88
MMP11P24347 DUX4L6-201ENST00000626483 1275 ntBASIC20.56■□□□□ 0.88
MMP11P24347 DUX4L1-201ENST00000627662 1275 ntBASIC20.56■□□□□ 0.88
MMP11P24347 DUX4L8-201ENST00000629013 1275 ntBASIC20.56■□□□□ 0.88
MMP11P24347 DUX4L3-201ENST00000630187 1275 ntBASIC20.56■□□□□ 0.88
MMP11P24347 DUX4L7-201ENST00000630678 1275 ntBASIC20.56■□□□□ 0.88
MMP11P24347 DUX4L5-201ENST00000630834 1275 ntBASIC20.56■□□□□ 0.88
MMP11P24347 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.56■□□□□ 0.88
MMP11P24347 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP11P24347 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.56■□□□□ 0.88
MMP11P24347 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP11P24347 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
MMP11P24347 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
MMP11P24347 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MMP11P24347 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP11P24347 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP11P24347 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP11P24347 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MMP11P24347 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
MMP11P24347 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.55■□□□□ 0.88
MMP11P24347 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP11P24347 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.55■□□□□ 0.88
MMP11P24347 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MMP11P24347 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP11P24347 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP11P24347 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MMP11P24347 LINC02228-203ENST00000641970 1355 ntBASIC20.55■□□□□ 0.88
MMP11P24347 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MMP11P24347 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.55■□□□□ 0.88
MMP11P24347 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP11P24347 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP11P24347 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.54■□□□□ 0.88
MMP11P24347 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP11P24347 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
MMP11P24347 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.54■□□□□ 0.88
MMP11P24347 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.54■□□□□ 0.88
MMP11P24347 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.54■□□□□ 0.88
MMP11P24347 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP11P24347 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC20.54■□□□□ 0.88
MMP11P24347 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.54■□□□□ 0.88
MMP11P24347 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MMP11P24347 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP11P24347 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP11P24347 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.54■□□□□ 0.88
MMP11P24347 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP11P24347 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.54■□□□□ 0.88
MMP11P24347 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP11P24347 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
MMP11P24347 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MMP11P24347 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.53■□□□□ 0.88
MMP11P24347 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
MMP11P24347 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP11P24347 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.53■□□□□ 0.88
MMP11P24347 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.53■□□□□ 0.88
MMP11P24347 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.53■□□□□ 0.88
MMP11P24347 KRT18P5-201ENST00000436075 1291 ntBASIC20.53■□□□□ 0.88
MMP11P24347 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.53■□□□□ 0.88
MMP11P24347 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.53■□□□□ 0.88
MMP11P24347 CCDC92B-201ENST00000575506 885 ntBASIC20.53■□□□□ 0.88
MMP11P24347 AC087239.1-201ENST00000622671 572 ntBASIC20.53■□□□□ 0.88
MMP11P24347 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.53■□□□□ 0.88
MMP11P24347 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.53■□□□□ 0.88
MMP11P24347 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
MMP11P24347 ECEL1P1-201ENST00000373592 1742 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms