Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 COA2YPL189C-A 207 nt3.63□□□□□ -1.83
VPS3P23643 ARO9YHR137W 1542 nt3.63□□□□□ -1.83
VPS3P23643 PGS1YCL004W 1566 nt3.63□□□□□ -1.83
VPS3P23643 SPB4YFL002C 1821 nt3.63□□□□□ -1.83
VPS3P23643 RNT1YMR239C 1416 nt3.62□□□□□ -1.83
VPS3P23643 YPR022CYPR022C 3402 nt3.62□□□□□ -1.83
VPS3P23643 BYE1YKL005C 1785 nt3.62□□□□□ -1.83
VPS3P23643 FAD1YDL045C 921 nt3.62□□□□□ -1.83
VPS3P23643 MRPL11YDL202W 750 nt3.62□□□□□ -1.83
VPS3P23643 ANB1YJR047C 474 nt3.62□□□□□ -1.83
VPS3P23643 YKT6YKL196C 603 nt3.62□□□□□ -1.83
VPS3P23643 YLR462WYLR462W 609 nt3.62□□□□□ -1.83
VPS3P23643 RPL19BYBL027W 570 nt3.62□□□□□ -1.83
VPS3P23643 TVP18YMR071C 504 nt3.62□□□□□ -1.83
VPS3P23643 MCK1YNL307C 1128 nt3.62□□□□□ -1.83
VPS3P23643 TIR2YOR010C 756 nt3.62□□□□□ -1.83
VPS3P23643 RRP36YOR287C 903 nt3.62□□□□□ -1.83
VPS3P23643 FDH2YPL275W 711 nt3.62□□□□□ -1.83
VPS3P23643 LCB5YLR260W 2064 nt3.62□□□□□ -1.83
VPS3P23643 SEA4YBL104C 3117 nt3.62□□□□□ -1.83
VPS3P23643 SSM4YIL030C 3960 nt3.61□□□□□ -1.83
VPS3P23643 CIT1YNR001C 1440 nt3.61□□□□□ -1.83
VPS3P23643 YCR101CYCR101C 549 nt3.61□□□□□ -1.83
VPS3P23643 YDR149CYDR149C 708 nt3.61□□□□□ -1.83
VPS3P23643 PFA5YDR459C 1125 nt3.61□□□□□ -1.83
VPS3P23643 CLC1YGR167W 702 nt3.61□□□□□ -1.83
VPS3P23643 SNL1YIL016W 480 nt3.61□□□□□ -1.83
VPS3P23643 VTA1YLR181C 993 nt3.61□□□□□ -1.83
VPS3P23643 YOR073W-AYOR073W-A 234 nt3.61□□□□□ -1.83
VPS3P23643 ANT1YPR128C 987 nt3.61□□□□□ -1.83
VPS3P23643 NEM1YHR004C 1341 nt3.61□□□□□ -1.83
VPS3P23643 RPN2YIL075C 2838 nt3.61□□□□□ -1.83
VPS3P23643 UTP25YIL091C 2166 nt3.61□□□□□ -1.83
VPS3P23643 SLM2YNL047C 1971 nt3.6□□□□□ -1.83
VPS3P23643 tC(GCA)BtC(GCA)B 72 nt3.6□□□□□ -1.83
VPS3P23643 tC(GCA)GtC(GCA)G 72 nt3.6□□□□□ -1.83
VPS3P23643 tC(GCA)P1tC(GCA)P1 72 nt3.6□□□□□ -1.83
VPS3P23643 tC(GCA)P2tC(GCA)P2 72 nt3.6□□□□□ -1.83
VPS3P23643 YMR122W-AYMR122W-A 255 nt3.6□□□□□ -1.83
VPS3P23643 RTK1YDL025C 1863 nt3.6□□□□□ -1.83
VPS3P23643 ETP1YHL010C 1758 nt3.59□□□□□ -1.83
VPS3P23643 tK(UUU)DtK(UUU)D 73 nt3.59□□□□□ -1.83
VPS3P23643 tK(UUU)G1tK(UUU)G1 73 nt3.59□□□□□ -1.83
VPS3P23643 tK(UUU)G2tK(UUU)G2 73 nt3.59□□□□□ -1.83
VPS3P23643 tK(UUU)KtK(UUU)K 73 nt3.59□□□□□ -1.83
VPS3P23643 tK(UUU)LtK(UUU)L 73 nt3.59□□□□□ -1.83
VPS3P23643 tK(UUU)OtK(UUU)O 73 nt3.59□□□□□ -1.83
VPS3P23643 tK(UUU)PtK(UUU)P 73 nt3.59□□□□□ -1.83
VPS3P23643 YGL041W-AYGL041W-A 465 nt3.59□□□□□ -1.83
VPS3P23643 YLR352WYLR352W 2424 nt3.58□□□□□ -1.84
VPS3P23643 YDL032WYDL032W 312 nt3.58□□□□□ -1.84
VPS3P23643 OPI6YDL096C 327 nt3.58□□□□□ -1.84
VPS3P23643 YEL032C-AYEL032C-A 162 nt3.58□□□□□ -1.84
VPS3P23643 SOD1YJR104C 465 nt3.58□□□□□ -1.84
VPS3P23643 RIM11YMR139W 1113 nt3.58□□□□□ -1.84
VPS3P23643 SIL1YOL031C 1266 nt3.58□□□□□ -1.84
VPS3P23643 RIB5YBR256C 717 nt3.58□□□□□ -1.84
VPS3P23643 ALA1YOR335C 2877 nt3.58□□□□□ -1.84
VPS3P23643 IME4YGL192W 1803 nt3.58□□□□□ -1.84
VPS3P23643 YNR063WYNR063W 1824 nt3.58□□□□□ -1.84
VPS3P23643 MTR4YJL050W 3222 nt3.57□□□□□ -1.84
VPS3P23643 MGT1YDL200C 567 nt3.57□□□□□ -1.84
VPS3P23643 VFA1YER128W 612 nt3.57□□□□□ -1.84
VPS3P23643 MGA1YGR249W 1371 nt3.57□□□□□ -1.84
VPS3P23643 EPO1YMR124W 2832 nt3.57□□□□□ -1.84
VPS3P23643 STE6YKL209C 3873 nt3.57□□□□□ -1.84
VPS3P23643 PRP22YER013W 3438 nt3.57□□□□□ -1.84
VPS3P23643 HDA2YDR295C 2025 nt3.56□□□□□ -1.84
VPS3P23643 SET1YHR119W 3243 nt3.56□□□□□ -1.84
VPS3P23643 FBP26YJL155C 1359 nt3.56□□□□□ -1.84
VPS3P23643 STE14YDR410C 720 nt3.56□□□□□ -1.84
VPS3P23643 MMS2YGL087C 414 nt3.56□□□□□ -1.84
VPS3P23643 YGL214WYGL214W 486 nt3.56□□□□□ -1.84
VPS3P23643 COS8YHL048W 1146 nt3.56□□□□□ -1.84
VPS3P23643 YIL047C-AYIL047C-A 369 nt3.56□□□□□ -1.84
VPS3P23643 RAD5YLR032W 3510 nt3.56□□□□□ -1.84
VPS3P23643 RRP5YMR229C 5190 nt3.56□□□□□ -1.84
VPS3P23643 ASI1YMR119W 1875 nt3.56□□□□□ -1.84
VPS3P23643 SHQ1YIL104C 1524 nt3.55□□□□□ -1.84
VPS3P23643 YHR214C-EYHR214C-E 300 nt3.55□□□□□ -1.84
VPS3P23643 LSM1YJL124C 519 nt3.55□□□□□ -1.84
VPS3P23643 YAR070CYAR070C 300 nt3.55□□□□□ -1.84
VPS3P23643 YLR402WYLR402W 192 nt3.55□□□□□ -1.84
VPS3P23643 ERD2YBL040C 660 nt3.55□□□□□ -1.84
VPS3P23643 RPC34YNR003C 954 nt3.55□□□□□ -1.84
VPS3P23643 CPR8YNR028W 927 nt3.55□□□□□ -1.84
VPS3P23643 LDS2YOL047C 1071 nt3.55□□□□□ -1.84
VPS3P23643 MED7YOL135C 669 nt3.55□□□□□ -1.84
VPS3P23643 YPL168WYPL168W 1293 nt3.55□□□□□ -1.84
VPS3P23643 YPR077CYPR077C 372 nt3.55□□□□□ -1.84
VPS3P23643 SQS1YNL224C 2304 nt3.55□□□□□ -1.84
VPS3P23643 YBR238CYBR238C 2196 nt3.55□□□□□ -1.84
VPS3P23643 MSR1YHR091C 1932 nt3.54□□□□□ -1.84
VPS3P23643 TED1YIL039W 1422 nt3.54□□□□□ -1.84
VPS3P23643 APM1YPL259C 1428 nt3.54□□□□□ -1.84
VPS3P23643 RNY1YPL123C 1305 nt3.54□□□□□ -1.84
VPS3P23643 TRS120YDR407C 3870 nt3.54□□□□□ -1.84
VPS3P23643 YFL065CYFL065C 309 nt3.54□□□□□ -1.84
VPS3P23643 tV(CAC)DtV(CAC)D 73 nt3.54□□□□□ -1.84
VPS3P23643 tV(CAC)HtV(CAC)H 73 nt3.54□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 16.8 ms