Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTLA4P16410 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CTLA4P16410 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
CTLA4P16410 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CTLA4P16410 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTLA4P16410 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTLA4P16410 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTLA4P16410 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTLA4P16410 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.26■□□□□ 0.67
CTLA4P16410 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.26■□□□□ 0.67
CTLA4P16410 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.26■□□□□ 0.67
CTLA4P16410 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.26■□□□□ 0.67
CTLA4P16410 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CTLA4P16410 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CTLA4P16410 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTLA4P16410 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTLA4P16410 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.25■□□□□ 0.67
CTLA4P16410 AC007375.3-201ENST00000600936 2314 ntBASIC19.25■□□□□ 0.67
CTLA4P16410 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTLA4P16410 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTLA4P16410 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.25■□□□□ 0.67
CTLA4P16410 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTLA4P16410 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.25■□□□□ 0.67
CTLA4P16410 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.25■□□□□ 0.67
CTLA4P16410 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTLA4P16410 AC010525.1-201ENST00000585559 441 ntBASIC19.25■□□□□ 0.67
CTLA4P16410 AC010542.4-201ENST00000563151 1910 ntBASIC19.25■□□□□ 0.67
CTLA4P16410 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CTLA4P16410 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTLA4P16410 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CTLA4P16410 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.25■□□□□ 0.67
CTLA4P16410 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.24■□□□□ 0.67
CTLA4P16410 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
CTLA4P16410 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTLA4P16410 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTLA4P16410 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.24■□□□□ 0.67
CTLA4P16410 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.24■□□□□ 0.67
CTLA4P16410 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTLA4P16410 AC079089.2-201ENST00000531211 1277 ntBASIC19.24■□□□□ 0.67
CTLA4P16410 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTLA4P16410 AL138724.1-201ENST00000606771 1088 ntBASIC19.24■□□□□ 0.67
CTLA4P16410 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CTLA4P16410 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.24■□□□□ 0.67
CTLA4P16410 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTLA4P16410 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CTLA4P16410 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTLA4P16410 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTLA4P16410 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTLA4P16410 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTLA4P16410 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTLA4P16410 FAM99A-202ENST00000538190 1989 ntBASIC19.23■□□□□ 0.67
CTLA4P16410 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTLA4P16410 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.23■□□□□ 0.67
CTLA4P16410 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.23■□□□□ 0.67
CTLA4P16410 DUX4L19-201ENST00000557448 1267 ntBASIC19.23■□□□□ 0.67
CTLA4P16410 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.23■□□□□ 0.67
CTLA4P16410 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTLA4P16410 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CTLA4P16410 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.22■□□□□ 0.67
CTLA4P16410 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTLA4P16410 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.22■□□□□ 0.67
CTLA4P16410 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.22■□□□□ 0.67
CTLA4P16410 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.22■□□□□ 0.67
CTLA4P16410 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTLA4P16410 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CTLA4P16410 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.22■□□□□ 0.67
CTLA4P16410 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTLA4P16410 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.22■□□□□ 0.67
CTLA4P16410 AC068587.7-201ENST00000641602 218 ntBASIC19.22■□□□□ 0.67
CTLA4P16410 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CTLA4P16410 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTLA4P16410 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CTLA4P16410 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTLA4P16410 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.21■□□□□ 0.67
CTLA4P16410 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.21■□□□□ 0.67
CTLA4P16410 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTLA4P16410 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTLA4P16410 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTLA4P16410 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTLA4P16410 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTLA4P16410 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CTLA4P16410 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CTLA4P16410 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTLA4P16410 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CTLA4P16410 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTLA4P16410 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTLA4P16410 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.21■□□□□ 0.67
CTLA4P16410 AC136469.2-201ENST00000623944 1028 ntBASIC19.21■□□□□ 0.67
CTLA4P16410 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.21■□□□□ 0.67
CTLA4P16410 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.21■□□□□ 0.67
CTLA4P16410 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CTLA4P16410 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.21■□□□□ 0.67
CTLA4P16410 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.21■□□□□ 0.67
CTLA4P16410 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTLA4P16410 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CTLA4P16410 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTLA4P16410 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTLA4P16410 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CTLA4P16410 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTLA4P16410 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms