Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL4P13236 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL4P13236 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.62■□□□□ 0.89
CCL4P13236 MFSD11-216ENST00000590393 1141 ntBASIC20.62■□□□□ 0.89
CCL4P13236 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL4P13236 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CCL4P13236 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL4P13236 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCL4P13236 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.61■□□□□ 0.89
CCL4P13236 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL4P13236 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL4P13236 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL4P13236 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL4P13236 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.61■□□□□ 0.89
CCL4P13236 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.61■□□□□ 0.89
CCL4P13236 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
CCL4P13236 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL4P13236 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL4P13236 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCL4P13236 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.6■□□□□ 0.89
CCL4P13236 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCL4P13236 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCL4P13236 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL4P13236 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL4P13236 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CCL4P13236 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.6■□□□□ 0.89
CCL4P13236 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.6■□□□□ 0.89
CCL4P13236 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.6■□□□□ 0.89
CCL4P13236 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.6■□□□□ 0.89
CCL4P13236 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CCL4P13236 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.6■□□□□ 0.89
CCL4P13236 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL4P13236 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL4P13236 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL4P13236 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL4P13236 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL4P13236 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
CCL4P13236 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.59■□□□□ 0.89
CCL4P13236 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL4P13236 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.59■□□□□ 0.89
CCL4P13236 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.59■□□□□ 0.89
CCL4P13236 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CCL4P13236 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.58■□□□□ 0.89
CCL4P13236 AC092068.2-201ENST00000590491 1708 ntBASIC20.58■□□□□ 0.89
CCL4P13236 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.58■□□□□ 0.89
CCL4P13236 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.58■□□□□ 0.89
CCL4P13236 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.58■□□□□ 0.89
CCL4P13236 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCL4P13236 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL4P13236 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.58■□□□□ 0.89
CCL4P13236 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCL4P13236 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CCL4P13236 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CCL4P13236 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.58■□□□□ 0.89
CCL4P13236 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
CCL4P13236 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.58■□□□□ 0.89
CCL4P13236 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL4P13236 DUSP8P5-201ENST00000422884 1815 ntBASIC20.57■□□□□ 0.88
CCL4P13236 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.57■□□□□ 0.88
CCL4P13236 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4P13236 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4P13236 GPX1P1-201ENST00000388829 606 ntBASIC20.57■□□□□ 0.88
CCL4P13236 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCL4P13236 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.57■□□□□ 0.88
CCL4P13236 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.57■□□□□ 0.88
CCL4P13236 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.57■□□□□ 0.88
CCL4P13236 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4P13236 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.57■□□□□ 0.88
CCL4P13236 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.57■□□□□ 0.88
CCL4P13236 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CCL4P13236 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4P13236 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4P13236 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4P13236 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4P13236 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL4P13236 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
CCL4P13236 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCL4P13236 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL4P13236 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL4P13236 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCL4P13236 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CCL4P13236 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.56■□□□□ 0.88
CCL4P13236 UBE2DNL-204ENST00000602536 740 ntBASIC20.56■□□□□ 0.88
CCL4P13236 LINC01960-201ENST00000563759 1884 ntBASIC20.56■□□□□ 0.88
CCL4P13236 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL4P13236 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCL4P13236 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
CCL4P13236 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCL4P13236 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCL4P13236 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CCL4P13236 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.55■□□□□ 0.88
CCL4P13236 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.55■□□□□ 0.88
CCL4P13236 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCL4P13236 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCL4P13236 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCL4P13236 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCL4P13236 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCL4P13236 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.54■□□□□ 0.88
CCL4P13236 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.54■□□□□ 0.88
CCL4P13236 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms