Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD28P10747 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD28P10747 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC16.94■□□□□ 0.3
CD28P10747 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD28P10747 ANOS2P-203ENST00000472227 1816 ntBASIC16.94■□□□□ 0.3
CD28P10747 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.94■□□□□ 0.3
CD28P10747 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.94■□□□□ 0.3
CD28P10747 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CD28P10747 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC16.94■□□□□ 0.3
CD28P10747 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.94■□□□□ 0.3
CD28P10747 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.94■□□□□ 0.3
CD28P10747 AC080038.1-201ENST00000611274 1154 ntBASIC16.94■□□□□ 0.3
CD28P10747 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC16.94■□□□□ 0.3
CD28P10747 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
CD28P10747 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CD28P10747 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD28P10747 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD28P10747 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CD28P10747 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD28P10747 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC16.93■□□□□ 0.3
CD28P10747 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD28P10747 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.93■□□□□ 0.3
CD28P10747 DUSP8P3-201ENST00000399571 1760 ntBASIC16.93■□□□□ 0.3
CD28P10747 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC16.93■□□□□ 0.3
CD28P10747 ID1-201ENST00000376105 1233 ntBASIC16.93■□□□□ 0.3
CD28P10747 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD28P10747 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.93■□□□□ 0.3
CD28P10747 AC006015.1-201ENST00000429970 570 ntBASIC16.93■□□□□ 0.3
CD28P10747 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC16.93■□□□□ 0.3
CD28P10747 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD28P10747 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD28P10747 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD28P10747 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD28P10747 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD28P10747 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD28P10747 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CD28P10747 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CD28P10747 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD28P10747 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CD28P10747 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CD28P10747 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.92■□□□□ 0.3
CD28P10747 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD28P10747 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD28P10747 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD28P10747 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD28P10747 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.92■□□□□ 0.3
CD28P10747 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.92■□□□□ 0.3
CD28P10747 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.92■□□□□ 0.3
CD28P10747 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.92■□□□□ 0.3
CD28P10747 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD28P10747 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD28P10747 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD28P10747 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD28P10747 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CD28P10747 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CD28P10747 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CD28P10747 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD28P10747 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD28P10747 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CD28P10747 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD28P10747 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD28P10747 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC16.91■□□□□ 0.3
CD28P10747 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.91■□□□□ 0.3
CD28P10747 AC079140.4-201ENST00000507448 529 ntBASIC16.91■□□□□ 0.3
CD28P10747 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.91■□□□□ 0.3
CD28P10747 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CD28P10747 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.91■□□□□ 0.3
CD28P10747 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD28P10747 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CD28P10747 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD28P10747 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD28P10747 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CD28P10747 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD28P10747 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD28P10747 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.9■□□□□ 0.3
CD28P10747 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.9■□□□□ 0.3
CD28P10747 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD28P10747 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC16.9■□□□□ 0.3
CD28P10747 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
CD28P10747 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD28P10747 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC16.9■□□□□ 0.3
CD28P10747 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD28P10747 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.9■□□□□ 0.3
CD28P10747 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CD28P10747 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.9■□□□□ 0.3
CD28P10747 KRT19P1-201ENST00000405746 1186 ntBASIC16.9■□□□□ 0.3
CD28P10747 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC16.9■□□□□ 0.3
CD28P10747 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC16.9■□□□□ 0.3
CD28P10747 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CD28P10747 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.9■□□□□ 0.3
CD28P10747 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CD28P10747 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.89■□□□□ 0.3
CD28P10747 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CD28P10747 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
CD28P10747 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CD28P10747 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD28P10747 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD28P10747 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CD28P10747 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD28P10747 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms