Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 ASG7YJL170C 630 nt5.05□□□□□ -1.6
TY1A-ER1P0CX71 RPL17AYKL180W 555 nt5.05□□□□□ -1.6
TY1A-ER1P0CX71 YKR041WYKR041W 753 nt5.05□□□□□ -1.6
TY1A-ER1P0CX71 YML084WYML084W 309 nt5.05□□□□□ -1.6
TY1A-ER1P0CX71 MRPL19YNL185C 477 nt5.05□□□□□ -1.6
TY1A-ER1P0CX71 MPD2YOL088C 834 nt5.05□□□□□ -1.6
TY1A-ER1P0CX71 YSY6YBR162W-A 198 nt5.05□□□□□ -1.6
TY1A-ER1P0CX71 ARX1YDR101C 1782 nt5.05□□□□□ -1.6
TY1A-ER1P0CX71 SYP1YCR030C 2613 nt5.05□□□□□ -1.6
TY1A-ER1P0CX71 NTH1YDR001C 2256 nt5.04□□□□□ -1.6
TY1A-ER1P0CX71 YDR154CYDR154C 351 nt5.04□□□□□ -1.6
TY1A-ER1P0CX71 YER076CYER076C 909 nt5.04□□□□□ -1.6
TY1A-ER1P0CX71 YAP5YIR018W 738 nt5.04□□□□□ -1.6
TY1A-ER1P0CX71 ASF1YJL115W 840 nt5.04□□□□□ -1.6
TY1A-ER1P0CX71 YMR315WYMR315W 1050 nt5.04□□□□□ -1.6
TY1A-ER1P0CX71 ATG3YNR007C 933 nt5.04□□□□□ -1.6
TY1A-ER1P0CX71 TRM112YNR046W 408 nt5.04□□□□□ -1.6
TY1A-ER1P0CX71 YPL088WYPL088W 1029 nt5.04□□□□□ -1.6
TY1A-ER1P0CX71 SEC66YBR171W 621 nt5.04□□□□□ -1.6
TY1A-ER1P0CX71 CUE3YGL110C 1875 nt5.03□□□□□ -1.6
TY1A-ER1P0CX71 HSP78YDR258C 2436 nt5.03□□□□□ -1.6
TY1A-ER1P0CX71 SPB4YFL002C 1821 nt5.03□□□□□ -1.6
TY1A-ER1P0CX71 YCL075WYCL075W 441 nt5.03□□□□□ -1.6
TY1A-ER1P0CX71 tR(ACG)DtR(ACG)D 73 nt5.03□□□□□ -1.6
TY1A-ER1P0CX71 tR(ACG)EtR(ACG)E 73 nt5.03□□□□□ -1.6
TY1A-ER1P0CX71 tR(ACG)KtR(ACG)K 73 nt5.03□□□□□ -1.6
TY1A-ER1P0CX71 tR(ACG)LtR(ACG)L 73 nt5.03□□□□□ -1.6
TY1A-ER1P0CX71 tR(ACG)OtR(ACG)O 73 nt5.03□□□□□ -1.6
TY1A-ER1P0CX71 PHO86YJL117W 936 nt5.03□□□□□ -1.6
TY1A-ER1P0CX71 PIR3YKL163W 978 nt5.03□□□□□ -1.6
TY1A-ER1P0CX71 YNR021WYNR021W 1215 nt5.03□□□□□ -1.6
TY1A-ER1P0CX71 YPL114WYPL114W 420 nt5.03□□□□□ -1.6
TY1A-ER1P0CX71 UGA3YDL170W 1587 nt5.03□□□□□ -1.6
TY1A-ER1P0CX71 AAP1YHR047C 2571 nt5.03□□□□□ -1.6
TY1A-ER1P0CX71 VTH1YIL173W 4650 nt5.02□□□□□ -1.61
TY1A-ER1P0CX71 VTH2YJL222W 4650 nt5.02□□□□□ -1.61
TY1A-ER1P0CX71 PRM7YDL039C 2097 nt5.02□□□□□ -1.61
TY1A-ER1P0CX71 GPD1YDL022W 1176 nt5.02□□□□□ -1.61
TY1A-ER1P0CX71 YDL057WYDL057W 987 nt5.02□□□□□ -1.61
TY1A-ER1P0CX71 PUG1YER185W 912 nt5.02□□□□□ -1.61
TY1A-ER1P0CX71 TAM41YGR046W 1158 nt5.02□□□□□ -1.61
TY1A-ER1P0CX71 CYS3YAL012W 1185 nt5.02□□□□□ -1.61
TY1A-ER1P0CX71 OCA2YNL056W 594 nt5.02□□□□□ -1.61
TY1A-ER1P0CX71 MRPS18YNL306W 654 nt5.02□□□□□ -1.61
TY1A-ER1P0CX71 CDC21YOR074C 915 nt5.02□□□□□ -1.61
TY1A-ER1P0CX71 MRPL51YPR100W 423 nt5.02□□□□□ -1.61
TY1A-ER1P0CX71 BUD7YOR299W 2241 nt5.02□□□□□ -1.61
TY1A-ER1P0CX71 FMP30YPL103C 1407 nt5.02□□□□□ -1.61
TY1A-ER1P0CX71 FRE3YOR381W 2136 nt5.02□□□□□ -1.61
TY1A-ER1P0CX71 YDR170W-AYDR170W-A 1323 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 YMR046CYMR046C 1323 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 ESA1YOR244W 1338 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 UGA1YGR019W 1416 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 YEL077CYEL077C 3834 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 SIP2YGL208W 1248 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 YKL102CYKL102C 306 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 YLR171WYLR171W 390 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 HRI1YLR301W 735 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 RHO2YNL090W 579 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 RUF23RUF23 254 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 MBF1YOR298C-A 456 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 YPL119C-AYPL119C-A 264 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 CBP3YPL215W 1008 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 THR4YCR053W 1545 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 VAN1YML115C 1608 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 YVC1YOR087W 2028 nt5.01□□□□□ -1.61
TY1A-ER1P0CX71 NRD1YNL251C 1728 nt5□□□□□ -1.61
TY1A-ER1P0CX71 RAD24YER173W 1980 nt5□□□□□ -1.61
TY1A-ER1P0CX71 THI20YOL055C 1656 nt5□□□□□ -1.61
TY1A-ER1P0CX71 YNL095CYNL095C 1929 nt5□□□□□ -1.61
TY1A-ER1P0CX71 PBP4YDL053C 558 nt5□□□□□ -1.61
TY1A-ER1P0CX71 MRF1YGL143C 1242 nt5□□□□□ -1.61
TY1A-ER1P0CX71 YIL177W-AYIL177W-A 483 nt5□□□□□ -1.61
TY1A-ER1P0CX71 YJL225W-AYJL225W-A 483 nt5□□□□□ -1.61
TY1A-ER1P0CX71 YJR037WYJR037W 384 nt5□□□□□ -1.61
TY1A-ER1P0CX71 TDA5YLR426W 981 nt5□□□□□ -1.61
TY1A-ER1P0CX71 TOM22YNL131W 459 nt5□□□□□ -1.61
TY1A-ER1P0CX71 YRO2YBR054W 1035 nt5□□□□□ -1.61
TY1A-ER1P0CX71 RAD28YDR030C 1521 nt5□□□□□ -1.61
TY1A-ER1P0CX71 YHK8YHR048W 1545 nt5□□□□□ -1.61
TY1A-ER1P0CX71 HSF1YGL073W 2502 nt5□□□□□ -1.61
TY1A-ER1P0CX71 SSY5YJL156C 2100 nt5□□□□□ -1.61
TY1A-ER1P0CX71 YOR365CYOR365C 2112 nt5□□□□□ -1.61
TY1A-ER1P0CX71 WHI2YOR043W 1461 nt5□□□□□ -1.61
TY1A-ER1P0CX71 RTS1YOR014W 2274 nt4.99□□□□□ -1.61
TY1A-ER1P0CX71 HCM1YCR065W 1695 nt4.99□□□□□ -1.61
TY1A-ER1P0CX71 VPS1YKR001C 2115 nt4.99□□□□□ -1.61
TY1A-ER1P0CX71 MEF2YJL102W 2460 nt4.99□□□□□ -1.61
TY1A-ER1P0CX71 DHR2YKL078W 2208 nt4.99□□□□□ -1.61
TY1A-ER1P0CX71 YER148W-AYER148W-A 579 nt4.99□□□□□ -1.61
TY1A-ER1P0CX71 LDB18YLL049W 540 nt4.99□□□□□ -1.61
TY1A-ER1P0CX71 BUR2YLR226W 1188 nt4.99□□□□□ -1.61
TY1A-ER1P0CX71 DDR48YMR173W 1293 nt4.99□□□□□ -1.61
TY1A-ER1P0CX71 YBL055CYBL055C 1257 nt4.99□□□□□ -1.61
TY1A-ER1P0CX71 PHO80YOL001W 882 nt4.99□□□□□ -1.61
TY1A-ER1P0CX71 YPL077CYPL077C 723 nt4.99□□□□□ -1.61
TY1A-ER1P0CX71 APD1YBR151W 951 nt4.99□□□□□ -1.61
TY1A-ER1P0CX71 SUL2YLR092W 2682 nt4.99□□□□□ -1.61
TY1A-ER1P0CX71 TFA1YKL028W 1449 nt4.98□□□□□ -1.61
TY1A-ER1P0CX71 MCM3YEL032W 2916 nt4.98□□□□□ -1.61
Retrieved 100 of 7,029 protein–RNA pairs in 26.4 ms