Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
SP9P0CG40 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
SP9P0CG40 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SP9P0CG40 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.69■■□□□ 1.06
SP9P0CG40 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.69■■□□□ 1.06
SP9P0CG40 AC006058.3-201ENST00000606217 1069 ntBASIC21.69■■□□□ 1.06
SP9P0CG40 AC083880.1-201ENST00000608266 535 ntBASIC21.69■■□□□ 1.06
SP9P0CG40 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC21.69■■□□□ 1.06
SP9P0CG40 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SP9P0CG40 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
SP9P0CG40 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SP9P0CG40 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.68■■□□□ 1.06
SP9P0CG40 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC21.68■■□□□ 1.06
SP9P0CG40 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.68■■□□□ 1.06
SP9P0CG40 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.68■■□□□ 1.06
SP9P0CG40 AC010141.2-201ENST00000452426 721 ntBASIC21.68■■□□□ 1.06
SP9P0CG40 AC128676.1-201ENST00000454392 318 ntBASIC21.68■■□□□ 1.06
SP9P0CG40 TERF1P5-201ENST00000477545 1207 ntBASIC21.68■■□□□ 1.06
SP9P0CG40 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.68■■□□□ 1.06
SP9P0CG40 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.68■■□□□ 1.06
SP9P0CG40 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.68■■□□□ 1.06
SP9P0CG40 OR10C1-204ENST00000622521 1039 ntBASIC21.68■■□□□ 1.06
SP9P0CG40 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SP9P0CG40 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SP9P0CG40 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SP9P0CG40 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.68■■□□□ 1.06
SP9P0CG40 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SP9P0CG40 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.67■■□□□ 1.06
SP9P0CG40 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.67■■□□□ 1.06
SP9P0CG40 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SP9P0CG40 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SP9P0CG40 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SP9P0CG40 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SP9P0CG40 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.67■■□□□ 1.06
SP9P0CG40 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SP9P0CG40 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.67■■□□□ 1.06
SP9P0CG40 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SP9P0CG40 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SP9P0CG40 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.67■■□□□ 1.06
SP9P0CG40 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.67■■□□□ 1.06
SP9P0CG40 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
SP9P0CG40 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SP9P0CG40 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.66■■□□□ 1.06
SP9P0CG40 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.66■■□□□ 1.06
SP9P0CG40 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
SP9P0CG40 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SP9P0CG40 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SP9P0CG40 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC21.66■■□□□ 1.06
SP9P0CG40 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SP9P0CG40 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SP9P0CG40 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
SP9P0CG40 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.66■■□□□ 1.06
SP9P0CG40 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
SP9P0CG40 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SP9P0CG40 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SP9P0CG40 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SP9P0CG40 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC21.65■■□□□ 1.06
SP9P0CG40 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.65■■□□□ 1.06
SP9P0CG40 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.65■■□□□ 1.06
SP9P0CG40 AC093787.1-201ENST00000450396 207 ntBASIC21.65■■□□□ 1.06
SP9P0CG40 AC097658.1-201ENST00000475555 843 ntBASIC21.65■■□□□ 1.06
SP9P0CG40 UNC93B4-201ENST00000505679 747 ntBASIC21.65■■□□□ 1.06
SP9P0CG40 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.65■■□□□ 1.06
SP9P0CG40 AC138907.5-202ENST00000569484 235 ntBASIC21.65■■□□□ 1.06
SP9P0CG40 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.65■■□□□ 1.06
SP9P0CG40 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.65■■□□□ 1.06
SP9P0CG40 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.65■■□□□ 1.06
SP9P0CG40 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SP9P0CG40 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SP9P0CG40 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SP9P0CG40 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.64■■□□□ 1.05
SP9P0CG40 AL512625.2-201ENST00000417533 625 ntBASIC21.64■■□□□ 1.05
SP9P0CG40 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.64■■□□□ 1.05
SP9P0CG40 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.64■■□□□ 1.05
SP9P0CG40 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.64■■□□□ 1.05
SP9P0CG40 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.64■■□□□ 1.05
SP9P0CG40 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
SP9P0CG40 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
SP9P0CG40 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.64■■□□□ 1.05
SP9P0CG40 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SP9P0CG40 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.64■■□□□ 1.05
SP9P0CG40 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.64■■□□□ 1.05
SP9P0CG40 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.64■■□□□ 1.05
SP9P0CG40 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SP9P0CG40 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SP9P0CG40 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SP9P0CG40 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SP9P0CG40 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SP9P0CG40 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SP9P0CG40 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.63■■□□□ 1.05
SP9P0CG40 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SP9P0CG40 BX276092.2-201ENST00000417668 665 ntBASIC21.63■■□□□ 1.05
SP9P0CG40 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.63■■□□□ 1.05
SP9P0CG40 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SP9P0CG40 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.63■■□□□ 1.05
SP9P0CG40 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SP9P0CG40 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.63■■□□□ 1.05
SP9P0CG40 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.63■■□□□ 1.05
SP9P0CG40 AC008694.1-202ENST00000636953 945 ntBASIC21.63■■□□□ 1.05
SP9P0CG40 MYC-209ENST00000641252 345 ntBASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms