Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.75■□□□□ 0.75
HTR1AP08908 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTR1AP08908 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTR1AP08908 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HTR1AP08908 KRT18P60-201ENST00000312876 1297 ntBASIC19.75■□□□□ 0.75
HTR1AP08908 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.75■□□□□ 0.75
HTR1AP08908 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC19.75■□□□□ 0.75
HTR1AP08908 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.75■□□□□ 0.75
HTR1AP08908 AC144652.1-201ENST00000609974 1624 ntBASIC19.75■□□□□ 0.75
HTR1AP08908 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HTR1AP08908 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HTR1AP08908 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTR1AP08908 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HTR1AP08908 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HTR1AP08908 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HTR1AP08908 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.74■□□□□ 0.75
HTR1AP08908 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HTR1AP08908 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.74■□□□□ 0.75
HTR1AP08908 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTR1AP08908 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
HTR1AP08908 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTR1AP08908 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTR1AP08908 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTR1AP08908 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTR1AP08908 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.74■□□□□ 0.75
HTR1AP08908 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTR1AP08908 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.74■□□□□ 0.75
HTR1AP08908 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.74■□□□□ 0.75
HTR1AP08908 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.74■□□□□ 0.75
HTR1AP08908 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HTR1AP08908 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTR1AP08908 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HTR1AP08908 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.74■□□□□ 0.75
HTR1AP08908 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HTR1AP08908 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTR1AP08908 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HTR1AP08908 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HTR1AP08908 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
HTR1AP08908 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTR1AP08908 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTR1AP08908 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HTR1AP08908 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.73■□□□□ 0.75
HTR1AP08908 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
HTR1AP08908 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HTR1AP08908 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HTR1AP08908 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
HTR1AP08908 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
HTR1AP08908 LINC01960-201ENST00000563759 1884 ntBASIC19.73■□□□□ 0.75
HTR1AP08908 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HTR1AP08908 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
HTR1AP08908 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
HTR1AP08908 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HTR1AP08908 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HTR1AP08908 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.72■□□□□ 0.75
HTR1AP08908 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HTR1AP08908 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HTR1AP08908 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.72■□□□□ 0.75
HTR1AP08908 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.72■□□□□ 0.75
HTR1AP08908 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1AP08908 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1AP08908 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1AP08908 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HTR1AP08908 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1AP08908 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.71■□□□□ 0.75
HTR1AP08908 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HTR1AP08908 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1AP08908 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC19.71■□□□□ 0.75
HTR1AP08908 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.71■□□□□ 0.75
HTR1AP08908 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.71■□□□□ 0.75
HTR1AP08908 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1AP08908 AC120024.1-201ENST00000562672 995 ntBASIC19.71■□□□□ 0.75
HTR1AP08908 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
HTR1AP08908 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HTR1AP08908 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1AP08908 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1AP08908 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1AP08908 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HTR1AP08908 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1AP08908 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
HTR1AP08908 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1AP08908 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1AP08908 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1AP08908 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1AP08908 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.7■□□□□ 0.74
HTR1AP08908 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.7■□□□□ 0.74
HTR1AP08908 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.7■□□□□ 0.74
HTR1AP08908 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.7■□□□□ 0.74
HTR1AP08908 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1AP08908 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1AP08908 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1AP08908 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1AP08908 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
HTR1AP08908 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
HTR1AP08908 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1AP08908 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1AP08908 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1AP08908 AL391422.3-201ENST00000603791 2761 ntBASIC19.69■□□□□ 0.74
HTR1AP08908 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.69■□□□□ 0.74
HTR1AP08908 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HTR1AP08908 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms