Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 SERP1-208ENST00000491660 830 ntTSL 2 BASIC29■■■□□ 2.23
COL5A2P05997 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC29■■■□□ 2.23
COL5A2P05997 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC29■■■□□ 2.23
COL5A2P05997 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC28.99■■■□□ 2.23
COL5A2P05997 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
COL5A2P05997 AC010141.2-201ENST00000452426 721 ntBASIC28.99■■■□□ 2.23
COL5A2P05997 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC28.99■■■□□ 2.23
COL5A2P05997 AC010536.3-201ENST00000620306 533 ntBASIC28.99■■■□□ 2.23
COL5A2P05997 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
COL5A2P05997 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
COL5A2P05997 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
COL5A2P05997 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
COL5A2P05997 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
COL5A2P05997 AC055733.4-201ENST00000638462 1354 ntBASIC28.98■■■□□ 2.23
COL5A2P05997 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
COL5A2P05997 AC105036.2-201ENST00000569468 176 ntBASIC28.98■■■□□ 2.23
COL5A2P05997 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
COL5A2P05997 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC28.98■■■□□ 2.23
COL5A2P05997 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
COL5A2P05997 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
COL5A2P05997 POU5F1P3-201ENST00000428824 1078 ntBASIC28.97■■■□□ 2.23
COL5A2P05997 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC28.97■■■□□ 2.23
COL5A2P05997 ITM2C-210ENST00000620962 501 ntBASIC28.97■■■□□ 2.23
COL5A2P05997 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL5A2P05997 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL5A2P05997 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
COL5A2P05997 CYP2T1P-201ENST00000432607 1285 ntBASIC28.96■■■□□ 2.23
COL5A2P05997 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC28.96■■■□□ 2.23
COL5A2P05997 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC28.96■■■□□ 2.23
COL5A2P05997 DUSP8P5-201ENST00000422884 1815 ntBASIC28.96■■■□□ 2.23
COL5A2P05997 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
COL5A2P05997 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
COL5A2P05997 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC28.95■■■□□ 2.23
COL5A2P05997 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
COL5A2P05997 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC28.95■■■□□ 2.23
COL5A2P05997 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC28.95■■■□□ 2.22
COL5A2P05997 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC28.95■■■□□ 2.22
COL5A2P05997 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC28.95■■■□□ 2.22
COL5A2P05997 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.22
COL5A2P05997 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC28.95■■■□□ 2.22
COL5A2P05997 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
COL5A2P05997 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC28.95■■■□□ 2.22
COL5A2P05997 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
COL5A2P05997 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC28.95■■■□□ 2.22
COL5A2P05997 MARS-234ENST00000630571 216 ntTSL 5 BASIC28.95■■■□□ 2.22
COL5A2P05997 MARS-235ENST00000630803 183 ntTSL 3 BASIC28.95■■■□□ 2.22
COL5A2P05997 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
COL5A2P05997 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
COL5A2P05997 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC28.94■■■□□ 2.22
COL5A2P05997 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
COL5A2P05997 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC28.94■■■□□ 2.22
COL5A2P05997 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC28.94■■■□□ 2.22
COL5A2P05997 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
COL5A2P05997 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC28.94■■■□□ 2.22
COL5A2P05997 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
COL5A2P05997 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
COL5A2P05997 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC28.94■■■□□ 2.22
COL5A2P05997 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
COL5A2P05997 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
COL5A2P05997 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC28.93■■■□□ 2.22
COL5A2P05997 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
COL5A2P05997 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC28.93■■■□□ 2.22
COL5A2P05997 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC28.93■■■□□ 2.22
COL5A2P05997 AC138907.5-202ENST00000569484 235 ntBASIC28.92■■■□□ 2.22
COL5A2P05997 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL5A2P05997 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC28.92■■■□□ 2.22
COL5A2P05997 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.92■■■□□ 2.22
COL5A2P05997 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC28.92■■■□□ 2.22
COL5A2P05997 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL5A2P05997 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
COL5A2P05997 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL5A2P05997 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
COL5A2P05997 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC28.91■■■□□ 2.22
COL5A2P05997 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC28.91■■■□□ 2.22
COL5A2P05997 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC28.9■■■□□ 2.22
COL5A2P05997 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
COL5A2P05997 PRORSD1P-201ENST00000295112 541 ntBASIC28.9■■■□□ 2.22
COL5A2P05997 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC28.9■■■□□ 2.22
COL5A2P05997 KRT18P20-201ENST00000548986 1279 ntBASIC28.9■■■□□ 2.22
COL5A2P05997 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC28.9■■■□□ 2.22
COL5A2P05997 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC28.89■■■□□ 2.22
COL5A2P05997 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC28.89■■■□□ 2.22
COL5A2P05997 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC28.89■■■□□ 2.22
COL5A2P05997 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC28.89■■■□□ 2.22
COL5A2P05997 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
COL5A2P05997 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC28.89■■■□□ 2.22
COL5A2P05997 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC28.89■■■□□ 2.22
COL5A2P05997 AC013268.1-206ENST00000638368 961 ntBASIC28.89■■■□□ 2.22
COL5A2P05997 AC112229.1-201ENST00000639295 961 ntBASIC28.89■■■□□ 2.22
COL5A2P05997 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
COL5A2P05997 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC28.89■■■□□ 2.21
COL5A2P05997 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
COL5A2P05997 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC28.88■■■□□ 2.21
COL5A2P05997 AC004812.2-201ENST00000611079 2094 ntBASIC28.88■■■□□ 2.21
COL5A2P05997 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC28.88■■■□□ 2.21
COL5A2P05997 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
COL5A2P05997 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
COL5A2P05997 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC28.88■■■□□ 2.21
COL5A2P05997 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC28.88■■■□□ 2.21
COL5A2P05997 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC28.87■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms