Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
ALDH1A1P00352 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.09■■□□□ 1.61
ALDH1A1P00352 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.09■■□□□ 1.61
ALDH1A1P00352 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
ALDH1A1P00352 RPS2P4-201ENST00000476944 856 ntBASIC25.09■■□□□ 1.61
ALDH1A1P00352 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC25.09■■□□□ 1.61
ALDH1A1P00352 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC25.09■■□□□ 1.61
ALDH1A1P00352 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC25.09■■□□□ 1.61
ALDH1A1P00352 OR10C1-204ENST00000622521 1039 ntBASIC25.09■■□□□ 1.61
ALDH1A1P00352 AL121749.1-202ENST00000609313 2153 ntBASIC25.08■■□□□ 1.61
ALDH1A1P00352 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC25.08■■□□□ 1.61
ALDH1A1P00352 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC25.08■■□□□ 1.61
ALDH1A1P00352 ESRRAP1-201ENST00000400596 1257 ntBASIC25.08■■□□□ 1.61
ALDH1A1P00352 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC25.08■■□□□ 1.61
ALDH1A1P00352 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC25.08■■□□□ 1.61
ALDH1A1P00352 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC25.08■■□□□ 1.61
ALDH1A1P00352 AC138907.5-202ENST00000569484 235 ntBASIC25.08■■□□□ 1.61
ALDH1A1P00352 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC25.08■■□□□ 1.61
ALDH1A1P00352 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC25.08■■□□□ 1.61
ALDH1A1P00352 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
ALDH1A1P00352 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
ALDH1A1P00352 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.08■■□□□ 1.6
ALDH1A1P00352 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
ALDH1A1P00352 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
ALDH1A1P00352 AC068338.2-201ENST00000563278 1430 ntBASIC25.07■■□□□ 1.6
ALDH1A1P00352 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
ALDH1A1P00352 AL596275.1-201ENST00000423464 877 ntBASIC25.07■■□□□ 1.6
ALDH1A1P00352 CYP2T1P-201ENST00000432607 1285 ntBASIC25.07■■□□□ 1.6
ALDH1A1P00352 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC25.07■■□□□ 1.6
ALDH1A1P00352 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
ALDH1A1P00352 TERF1P5-201ENST00000477545 1207 ntBASIC25.07■■□□□ 1.6
ALDH1A1P00352 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC25.07■■□□□ 1.6
ALDH1A1P00352 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ALDH1A1P00352 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC25.07■■□□□ 1.6
ALDH1A1P00352 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ALDH1A1P00352 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
ALDH1A1P00352 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
ALDH1A1P00352 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC25.06■■□□□ 1.6
ALDH1A1P00352 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC25.06■■□□□ 1.6
ALDH1A1P00352 AL512625.2-201ENST00000417533 625 ntBASIC25.06■■□□□ 1.6
ALDH1A1P00352 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ALDH1A1P00352 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.05■■□□□ 1.6
ALDH1A1P00352 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ALDH1A1P00352 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.05■■□□□ 1.6
ALDH1A1P00352 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.05■■□□□ 1.6
ALDH1A1P00352 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ALDH1A1P00352 PHB2-213ENST00000546111 858 ntTSL 2 BASIC25.05■■□□□ 1.6
ALDH1A1P00352 AC008694.1-202ENST00000636953 945 ntBASIC25.05■■□□□ 1.6
ALDH1A1P00352 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ALDH1A1P00352 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ALDH1A1P00352 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.05■■□□□ 1.6
ALDH1A1P00352 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
ALDH1A1P00352 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
ALDH1A1P00352 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ALDH1A1P00352 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ALDH1A1P00352 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ALDH1A1P00352 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ALDH1A1P00352 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
ALDH1A1P00352 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
ALDH1A1P00352 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC25.04■■□□□ 1.6
ALDH1A1P00352 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ALDH1A1P00352 AC007322.4-201ENST00000509611 723 ntBASIC25.04■■□□□ 1.6
ALDH1A1P00352 AC142381.4-202ENST00000563973 229 ntBASIC25.04■■□□□ 1.6
ALDH1A1P00352 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC25.04■■□□□ 1.6
ALDH1A1P00352 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
ALDH1A1P00352 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
ALDH1A1P00352 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
ALDH1A1P00352 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC25.03■■□□□ 1.6
ALDH1A1P00352 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC25.03■■□□□ 1.6
ALDH1A1P00352 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.03■■□□□ 1.6
ALDH1A1P00352 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ALDH1A1P00352 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC25.03■■□□□ 1.6
ALDH1A1P00352 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
ALDH1A1P00352 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.03■■□□□ 1.6
ALDH1A1P00352 AL158047.1-201ENST00000445918 881 ntBASIC25.03■■□□□ 1.6
ALDH1A1P00352 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC25.03■■□□□ 1.6
ALDH1A1P00352 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC25.03■■□□□ 1.6
ALDH1A1P00352 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
ALDH1A1P00352 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC25.02■■□□□ 1.6
ALDH1A1P00352 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
ALDH1A1P00352 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.02■■□□□ 1.6
ALDH1A1P00352 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
ALDH1A1P00352 CASP6-205ENST00000505486 538 ntTSL 4 BASIC25.02■■□□□ 1.6
ALDH1A1P00352 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC25.02■■□□□ 1.6
ALDH1A1P00352 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.02■■□□□ 1.6
ALDH1A1P00352 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.02■■□□□ 1.6
ALDH1A1P00352 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.01■■□□□ 1.59
ALDH1A1P00352 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
ALDH1A1P00352 AC097658.1-201ENST00000475555 843 ntBASIC25.01■■□□□ 1.59
ALDH1A1P00352 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC25.01■■□□□ 1.59
ALDH1A1P00352 AC069236.1-201ENST00000604339 616 ntBASIC25.01■■□□□ 1.59
ALDH1A1P00352 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ALDH1A1P00352 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
ALDH1A1P00352 AC055733.4-201ENST00000638462 1354 ntBASIC25.01■■□□□ 1.59
ALDH1A1P00352 AC079630.1-202ENST00000618127 1840 ntBASIC25■■□□□ 1.59
ALDH1A1P00352 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
ALDH1A1P00352 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25■■□□□ 1.59
ALDH1A1P00352 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC25■■□□□ 1.59
ALDH1A1P00352 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC25■■□□□ 1.59
ALDH1A1P00352 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms