Protein–RNA interactions for Protein: O95562

SFT2D2, Vesicle transport protein SFT2B, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D2O95562 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SFT2D2O95562 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.95■□□□□ 0.46
SFT2D2O95562 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.95■□□□□ 0.46
SFT2D2O95562 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SFT2D2O95562 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SFT2D2O95562 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SFT2D2O95562 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SFT2D2O95562 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SFT2D2O95562 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SFT2D2O95562 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.95■□□□□ 0.46
SFT2D2O95562 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.95■□□□□ 0.46
SFT2D2O95562 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.95■□□□□ 0.46
SFT2D2O95562 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.95■□□□□ 0.46
SFT2D2O95562 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SFT2D2O95562 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SFT2D2O95562 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.95■□□□□ 0.46
SFT2D2O95562 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SFT2D2O95562 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SFT2D2O95562 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.95■□□□□ 0.46
SFT2D2O95562 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SFT2D2O95562 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
SFT2D2O95562 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SFT2D2O95562 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SFT2D2O95562 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SFT2D2O95562 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SFT2D2O95562 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SFT2D2O95562 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SFT2D2O95562 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
SFT2D2O95562 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SFT2D2O95562 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SFT2D2O95562 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SFT2D2O95562 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC17.94■□□□□ 0.46
SFT2D2O95562 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SFT2D2O95562 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SFT2D2O95562 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SFT2D2O95562 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SFT2D2O95562 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SFT2D2O95562 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFT2D2O95562 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFT2D2O95562 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFT2D2O95562 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFT2D2O95562 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFT2D2O95562 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFT2D2O95562 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC17.93■□□□□ 0.46
SFT2D2O95562 MIR4281-201ENST00000580852 62 ntBASIC17.93■□□□□ 0.46
SFT2D2O95562 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SFT2D2O95562 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFT2D2O95562 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SFT2D2O95562 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SFT2D2O95562 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFT2D2O95562 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
SFT2D2O95562 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFT2D2O95562 RNF126P1-201ENST00000567452 1320 ntBASIC17.93■□□□□ 0.46
SFT2D2O95562 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.93■□□□□ 0.46
SFT2D2O95562 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SFT2D2O95562 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFT2D2O95562 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
SFT2D2O95562 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC17.93■□□□□ 0.46
SFT2D2O95562 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
SFT2D2O95562 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SFT2D2O95562 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SFT2D2O95562 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SFT2D2O95562 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SFT2D2O95562 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.92■□□□□ 0.46
SFT2D2O95562 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC17.92■□□□□ 0.46
SFT2D2O95562 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SFT2D2O95562 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
SFT2D2O95562 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SFT2D2O95562 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SFT2D2O95562 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SFT2D2O95562 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SFT2D2O95562 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SFT2D2O95562 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.92■□□□□ 0.46
SFT2D2O95562 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.91■□□□□ 0.46
SFT2D2O95562 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFT2D2O95562 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
SFT2D2O95562 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFT2D2O95562 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.91■□□□□ 0.46
SFT2D2O95562 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SFT2D2O95562 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.91■□□□□ 0.46
SFT2D2O95562 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SFT2D2O95562 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFT2D2O95562 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.91■□□□□ 0.46
SFT2D2O95562 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC17.91■□□□□ 0.46
SFT2D2O95562 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.91■□□□□ 0.46
SFT2D2O95562 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFT2D2O95562 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFT2D2O95562 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SFT2D2O95562 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.91■□□□□ 0.46
SFT2D2O95562 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFT2D2O95562 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC17.91■□□□□ 0.46
SFT2D2O95562 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFT2D2O95562 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFT2D2O95562 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SFT2D2O95562 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SFT2D2O95562 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SFT2D2O95562 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
SFT2D2O95562 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SFT2D2O95562 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SFT2D2O95562 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms