Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CPNE3O75131 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CPNE3O75131 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE3O75131 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.75■□□□□ 0.91
CPNE3O75131 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.75■□□□□ 0.91
CPNE3O75131 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.75■□□□□ 0.91
CPNE3O75131 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE3O75131 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.75■□□□□ 0.91
CPNE3O75131 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.75■□□□□ 0.91
CPNE3O75131 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.75■□□□□ 0.91
CPNE3O75131 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
CPNE3O75131 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE3O75131 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE3O75131 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE3O75131 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CPNE3O75131 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.75■□□□□ 0.91
CPNE3O75131 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE3O75131 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
CPNE3O75131 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
CPNE3O75131 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.74■□□□□ 0.91
CPNE3O75131 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.74■□□□□ 0.91
CPNE3O75131 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE3O75131 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE3O75131 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
CPNE3O75131 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.74■□□□□ 0.91
CPNE3O75131 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE3O75131 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE3O75131 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CPNE3O75131 IKBKGP1-201ENST00000612193 1073 ntBASIC20.74■□□□□ 0.91
CPNE3O75131 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE3O75131 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE3O75131 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE3O75131 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CPNE3O75131 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE3O75131 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE3O75131 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE3O75131 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE3O75131 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE3O75131 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.73■□□□□ 0.91
CPNE3O75131 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.73■□□□□ 0.91
CPNE3O75131 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CPNE3O75131 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.73■□□□□ 0.91
CPNE3O75131 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE3O75131 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CPNE3O75131 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.73■□□□□ 0.91
CPNE3O75131 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE3O75131 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE3O75131 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CPNE3O75131 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE3O75131 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CPNE3O75131 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.72■□□□□ 0.91
CPNE3O75131 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE3O75131 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE3O75131 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.72■□□□□ 0.91
CPNE3O75131 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.72■□□□□ 0.91
CPNE3O75131 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CPNE3O75131 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE3O75131 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.72■□□□□ 0.91
CPNE3O75131 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE3O75131 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.72■□□□□ 0.91
CPNE3O75131 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.72■□□□□ 0.91
CPNE3O75131 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CPNE3O75131 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE3O75131 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE3O75131 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CPNE3O75131 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE3O75131 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE3O75131 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.71■□□□□ 0.91
CPNE3O75131 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.71■□□□□ 0.91
CPNE3O75131 TPRG1LP1-201ENST00000598702 760 ntBASIC20.71■□□□□ 0.91
CPNE3O75131 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE3O75131 BX005040.4-201ENST00000637145 1518 ntBASIC20.71■□□□□ 0.91
CPNE3O75131 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CPNE3O75131 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE3O75131 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.71■□□□□ 0.91
CPNE3O75131 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CPNE3O75131 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CPNE3O75131 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.7■□□□□ 0.91
CPNE3O75131 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CPNE3O75131 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE3O75131 OXCT2P1-201ENST00000447263 1535 ntBASIC20.7■□□□□ 0.9
CPNE3O75131 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE3O75131 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
CPNE3O75131 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE3O75131 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CPNE3O75131 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE3O75131 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CPNE3O75131 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
CPNE3O75131 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.7■□□□□ 0.9
CPNE3O75131 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
CPNE3O75131 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE3O75131 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CPNE3O75131 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE3O75131 ANOS2P-203ENST00000472227 1816 ntBASIC20.69■□□□□ 0.9
CPNE3O75131 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CPNE3O75131 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.69■□□□□ 0.9
CPNE3O75131 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
CPNE3O75131 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.69■□□□□ 0.9
CPNE3O75131 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CPNE3O75131 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms