Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.59■□□□□ 0.73
ZIC3O60481 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZIC3O60481 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ZIC3O60481 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ZIC3O60481 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.58■□□□□ 0.73
ZIC3O60481 AC068473.5-201ENST00000616428 2072 ntBASIC19.58■□□□□ 0.73
ZIC3O60481 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.58■□□□□ 0.73
ZIC3O60481 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ZIC3O60481 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
ZIC3O60481 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZIC3O60481 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZIC3O60481 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
ZIC3O60481 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.58■□□□□ 0.72
ZIC3O60481 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZIC3O60481 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ZIC3O60481 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZIC3O60481 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZIC3O60481 AC139530.1-201ENST00000575312 1977 ntBASIC19.57■□□□□ 0.72
ZIC3O60481 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZIC3O60481 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.57■□□□□ 0.72
ZIC3O60481 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZIC3O60481 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZIC3O60481 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZIC3O60481 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ZIC3O60481 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZIC3O60481 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.57■□□□□ 0.72
ZIC3O60481 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.57■□□□□ 0.72
ZIC3O60481 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZIC3O60481 OR7E47P-201ENST00000546390 1422 ntBASIC19.57■□□□□ 0.72
ZIC3O60481 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZIC3O60481 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ZIC3O60481 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ZIC3O60481 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
ZIC3O60481 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZIC3O60481 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.56■□□□□ 0.72
ZIC3O60481 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ZIC3O60481 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZIC3O60481 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.56■□□□□ 0.72
ZIC3O60481 TPRG1LP1-201ENST00000598702 760 ntBASIC19.56■□□□□ 0.72
ZIC3O60481 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZIC3O60481 AC127496.7-201ENST00000625110 1798 ntBASIC19.56■□□□□ 0.72
ZIC3O60481 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZIC3O60481 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
ZIC3O60481 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ZIC3O60481 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZIC3O60481 LINC02228-203ENST00000641970 1355 ntBASIC19.56■□□□□ 0.72
ZIC3O60481 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZIC3O60481 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ZIC3O60481 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZIC3O60481 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZIC3O60481 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
ZIC3O60481 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
ZIC3O60481 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZIC3O60481 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
ZIC3O60481 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.55■□□□□ 0.72
ZIC3O60481 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZIC3O60481 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZIC3O60481 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZIC3O60481 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZIC3O60481 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.54■□□□□ 0.72
ZIC3O60481 MIR5787-201ENST00000611784 55 ntBASIC19.54■□□□□ 0.72
ZIC3O60481 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.54■□□□□ 0.72
ZIC3O60481 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZIC3O60481 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZIC3O60481 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.54■□□□□ 0.72
ZIC3O60481 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ZIC3O60481 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ZIC3O60481 AC080038.3-201ENST00000623346 1952 ntBASIC19.53■□□□□ 0.72
ZIC3O60481 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZIC3O60481 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZIC3O60481 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZIC3O60481 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ZIC3O60481 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZIC3O60481 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.53■□□□□ 0.72
ZIC3O60481 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZIC3O60481 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.53■□□□□ 0.72
ZIC3O60481 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZIC3O60481 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
ZIC3O60481 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZIC3O60481 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZIC3O60481 CCDC92B-201ENST00000575506 885 ntBASIC19.53■□□□□ 0.72
ZIC3O60481 TERF1P2-201ENST00000583350 1212 ntBASIC19.53■□□□□ 0.72
ZIC3O60481 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
ZIC3O60481 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.53■□□□□ 0.72
ZIC3O60481 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZIC3O60481 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ZIC3O60481 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZIC3O60481 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ZIC3O60481 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ZIC3O60481 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ZIC3O60481 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.52■□□□□ 0.72
ZIC3O60481 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.52■□□□□ 0.72
ZIC3O60481 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.52■□□□□ 0.72
ZIC3O60481 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ZIC3O60481 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ZIC3O60481 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ZIC3O60481 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.52■□□□□ 0.72
ZIC3O60481 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ZIC3O60481 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.52■□□□□ 0.72
ZIC3O60481 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms