Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LCMT2O60294 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LCMT2O60294 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LCMT2O60294 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LCMT2O60294 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LCMT2O60294 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.78■□□□□ 0.92
LCMT2O60294 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LCMT2O60294 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LCMT2O60294 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LCMT2O60294 AC242852.2-201ENST00000615738 1807 ntBASIC20.78■□□□□ 0.92
LCMT2O60294 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
LCMT2O60294 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LCMT2O60294 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LCMT2O60294 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
LCMT2O60294 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.78■□□□□ 0.92
LCMT2O60294 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LCMT2O60294 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LCMT2O60294 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LCMT2O60294 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LCMT2O60294 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LCMT2O60294 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.77■□□□□ 0.92
LCMT2O60294 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LCMT2O60294 EP400NL-214ENST00000641289 2402 ntBASIC20.76■□□□□ 0.91
LCMT2O60294 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCMT2O60294 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.76■□□□□ 0.91
LCMT2O60294 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCMT2O60294 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCMT2O60294 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCMT2O60294 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
LCMT2O60294 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.76■□□□□ 0.91
LCMT2O60294 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCMT2O60294 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCMT2O60294 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCMT2O60294 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LCMT2O60294 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LCMT2O60294 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
LCMT2O60294 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.75■□□□□ 0.91
LCMT2O60294 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.75■□□□□ 0.91
LCMT2O60294 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.75■□□□□ 0.91
LCMT2O60294 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
LCMT2O60294 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LCMT2O60294 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.75■□□□□ 0.91
LCMT2O60294 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.75■□□□□ 0.91
LCMT2O60294 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.75■□□□□ 0.91
LCMT2O60294 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.75■□□□□ 0.91
LCMT2O60294 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
LCMT2O60294 ECEL1P1-201ENST00000373592 1742 ntBASIC20.75■□□□□ 0.91
LCMT2O60294 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LCMT2O60294 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCMT2O60294 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.74■□□□□ 0.91
LCMT2O60294 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCMT2O60294 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCMT2O60294 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
LCMT2O60294 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCMT2O60294 MIR572-201ENST00000384983 95 ntBASIC20.74■□□□□ 0.91
LCMT2O60294 ZNRF2P3-201ENST00000424200 374 ntBASIC20.74■□□□□ 0.91
LCMT2O60294 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCMT2O60294 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.74■□□□□ 0.91
LCMT2O60294 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCMT2O60294 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
LCMT2O60294 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCMT2O60294 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCMT2O60294 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
LCMT2O60294 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.73■□□□□ 0.91
LCMT2O60294 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.73■□□□□ 0.91
LCMT2O60294 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LCMT2O60294 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.73■□□□□ 0.91
LCMT2O60294 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LCMT2O60294 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.73■□□□□ 0.91
LCMT2O60294 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.73■□□□□ 0.91
LCMT2O60294 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LCMT2O60294 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LCMT2O60294 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.73■□□□□ 0.91
LCMT2O60294 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.73■□□□□ 0.91
LCMT2O60294 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.73■□□□□ 0.91
LCMT2O60294 SMUG1P1-201ENST00000590640 811 ntBASIC20.73■□□□□ 0.91
LCMT2O60294 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.73■□□□□ 0.91
LCMT2O60294 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LCMT2O60294 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LCMT2O60294 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LCMT2O60294 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.73■□□□□ 0.91
LCMT2O60294 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LCMT2O60294 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LCMT2O60294 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LCMT2O60294 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LCMT2O60294 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LCMT2O60294 IRS3P-201ENST00000223076 1006 ntBASIC20.72■□□□□ 0.91
LCMT2O60294 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LCMT2O60294 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LCMT2O60294 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LCMT2O60294 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LCMT2O60294 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LCMT2O60294 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LCMT2O60294 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LCMT2O60294 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.72■□□□□ 0.91
LCMT2O60294 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.72■□□□□ 0.91
LCMT2O60294 OR7E47P-201ENST00000546390 1422 ntBASIC20.71■□□□□ 0.91
LCMT2O60294 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LCMT2O60294 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LCMT2O60294 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms