Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.72■□□□□ 0.91
PCDH7O60245 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH7O60245 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PCDH7O60245 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PCDH7O60245 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH7O60245 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH7O60245 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.71■□□□□ 0.91
PCDH7O60245 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.71■□□□□ 0.91
PCDH7O60245 AL138724.1-201ENST00000606771 1088 ntBASIC20.71■□□□□ 0.91
PCDH7O60245 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH7O60245 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
PCDH7O60245 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
PCDH7O60245 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH7O60245 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PCDH7O60245 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PCDH7O60245 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH7O60245 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH7O60245 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH7O60245 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH7O60245 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH7O60245 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.7■□□□□ 0.9
PCDH7O60245 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH7O60245 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.7■□□□□ 0.9
PCDH7O60245 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH7O60245 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PCDH7O60245 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDH7O60245 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH7O60245 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH7O60245 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH7O60245 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH7O60245 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PCDH7O60245 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH7O60245 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH7O60245 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDH7O60245 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH7O60245 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PCDH7O60245 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.7■□□□□ 0.9
PCDH7O60245 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH7O60245 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PCDH7O60245 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.69■□□□□ 0.9
PCDH7O60245 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH7O60245 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH7O60245 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
PCDH7O60245 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH7O60245 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH7O60245 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH7O60245 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDH7O60245 AC068587.7-201ENST00000641602 218 ntBASIC20.69■□□□□ 0.9
PCDH7O60245 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH7O60245 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.69■□□□□ 0.9
PCDH7O60245 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PCDH7O60245 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH7O60245 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PCDH7O60245 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH7O60245 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PCDH7O60245 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
PCDH7O60245 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDH7O60245 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
PCDH7O60245 AL136116.3-201ENST00000402907 1138 ntBASIC20.68■□□□□ 0.9
PCDH7O60245 AC010525.1-201ENST00000585559 441 ntBASIC20.68■□□□□ 0.9
PCDH7O60245 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.68■□□□□ 0.9
PCDH7O60245 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PCDH7O60245 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PCDH7O60245 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH7O60245 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PCDH7O60245 FBXW4P1-201ENST00000426721 2239 ntBASIC20.68■□□□□ 0.9
PCDH7O60245 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PCDH7O60245 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH7O60245 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH7O60245 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PCDH7O60245 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PCDH7O60245 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH7O60245 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH7O60245 AC079089.2-201ENST00000531211 1277 ntBASIC20.67■□□□□ 0.9
PCDH7O60245 AC136469.2-201ENST00000623944 1028 ntBASIC20.67■□□□□ 0.9
PCDH7O60245 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDH7O60245 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH7O60245 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDH7O60245 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH7O60245 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PCDH7O60245 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDH7O60245 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH7O60245 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.66■□□□□ 0.9
PCDH7O60245 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDH7O60245 AC131212.1-201ENST00000613771 668 ntBASIC20.66■□□□□ 0.9
PCDH7O60245 AC011298.3-201ENST00000615796 283 ntBASIC20.66■□□□□ 0.9
PCDH7O60245 AC087239.1-201ENST00000622671 572 ntBASIC20.66■□□□□ 0.9
PCDH7O60245 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH7O60245 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH7O60245 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH7O60245 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH7O60245 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH7O60245 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH7O60245 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
PCDH7O60245 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH7O60245 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH7O60245 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
PCDH7O60245 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH7O60245 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDH7O60245 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms