Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.62■□□□□ 0.57
PHF1O43189 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.62■□□□□ 0.57
PHF1O43189 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.62■□□□□ 0.57
PHF1O43189 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PHF1O43189 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHF1O43189 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHF1O43189 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHF1O43189 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PHF1O43189 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHF1O43189 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHF1O43189 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHF1O43189 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHF1O43189 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHF1O43189 AC137767.1-201ENST00000602918 1920 ntBASIC18.61■□□□□ 0.57
PHF1O43189 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.61■□□□□ 0.57
PHF1O43189 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHF1O43189 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHF1O43189 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.61■□□□□ 0.57
PHF1O43189 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHF1O43189 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PHF1O43189 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHF1O43189 MIR3181-201ENST00000578512 73 ntBASIC18.61■□□□□ 0.57
PHF1O43189 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHF1O43189 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PHF1O43189 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PHF1O43189 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PHF1O43189 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHF1O43189 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.6■□□□□ 0.57
PHF1O43189 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHF1O43189 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.6■□□□□ 0.57
PHF1O43189 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHF1O43189 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHF1O43189 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHF1O43189 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PHF1O43189 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHF1O43189 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHF1O43189 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.6■□□□□ 0.57
PHF1O43189 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.6■□□□□ 0.57
PHF1O43189 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHF1O43189 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.6■□□□□ 0.57
PHF1O43189 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PHF1O43189 KRT18P5-201ENST00000436075 1291 ntBASIC18.6■□□□□ 0.57
PHF1O43189 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.6■□□□□ 0.57
PHF1O43189 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.6■□□□□ 0.57
PHF1O43189 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.6■□□□□ 0.57
PHF1O43189 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.6■□□□□ 0.57
PHF1O43189 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.6■□□□□ 0.57
PHF1O43189 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.6■□□□□ 0.57
PHF1O43189 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.6■□□□□ 0.57
PHF1O43189 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.6■□□□□ 0.57
PHF1O43189 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PHF1O43189 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.6■□□□□ 0.57
PHF1O43189 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PHF1O43189 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PHF1O43189 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PHF1O43189 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
PHF1O43189 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.59■□□□□ 0.57
PHF1O43189 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PHF1O43189 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.59■□□□□ 0.57
PHF1O43189 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHF1O43189 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHF1O43189 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.59■□□□□ 0.57
PHF1O43189 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.59■□□□□ 0.57
PHF1O43189 pRNA.6-201ENST00000610482 90 ntBASIC18.59■□□□□ 0.57
PHF1O43189 pRNA.5-201ENST00000612139 90 ntBASIC18.59■□□□□ 0.57
PHF1O43189 pRNA.11-201ENST00000618423 90 ntBASIC18.59■□□□□ 0.57
PHF1O43189 pRNA.13-201ENST00000619112 90 ntBASIC18.59■□□□□ 0.57
PHF1O43189 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
PHF1O43189 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PHF1O43189 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PHF1O43189 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.59■□□□□ 0.57
PHF1O43189 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PHF1O43189 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PHF1O43189 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PHF1O43189 AL138724.1-201ENST00000606771 1088 ntBASIC18.58■□□□□ 0.56
PHF1O43189 AC011298.3-201ENST00000615796 283 ntBASIC18.58■□□□□ 0.56
PHF1O43189 AC092437.1-201ENST00000624794 1048 ntBASIC18.58■□□□□ 0.56
PHF1O43189 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHF1O43189 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
PHF1O43189 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.58■□□□□ 0.56
PHF1O43189 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHF1O43189 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PHF1O43189 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
PHF1O43189 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHF1O43189 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHF1O43189 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHF1O43189 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHF1O43189 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHF1O43189 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHF1O43189 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHF1O43189 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PHF1O43189 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PHF1O43189 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.57■□□□□ 0.56
PHF1O43189 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.57■□□□□ 0.56
PHF1O43189 AC004911.1-201ENST00000416316 871 ntBASIC18.57■□□□□ 0.56
PHF1O43189 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.57■□□□□ 0.56
PHF1O43189 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.57■□□□□ 0.56
PHF1O43189 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.57■□□□□ 0.56
PHF1O43189 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PHF1O43189 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms