Protein–RNA interactions for Protein: O15118

NPC1, Niemann-Pick C1 protein, humanhuman

Predictions only

Length 1,278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1O15118 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.99■■□□□ 1.11
NPC1O15118 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.99■■□□□ 1.11
NPC1O15118 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPC1O15118 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.99■■□□□ 1.11
NPC1O15118 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPC1O15118 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.98■■□□□ 1.11
NPC1O15118 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NPC1O15118 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.98■■□□□ 1.11
NPC1O15118 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.98■■□□□ 1.11
NPC1O15118 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.98■■□□□ 1.11
NPC1O15118 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.98■■□□□ 1.11
NPC1O15118 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NPC1O15118 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPC1O15118 ID1-201ENST00000376105 1233 ntBASIC21.97■■□□□ 1.11
NPC1O15118 METTL26-203ENST00000397664 604 ntTSL 2 BASIC21.97■■□□□ 1.11
NPC1O15118 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NPC1O15118 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.97■■□□□ 1.11
NPC1O15118 BID-214ENST00000617586 542 ntTSL 5 BASIC21.97■■□□□ 1.11
NPC1O15118 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPC1O15118 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPC1O15118 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
NPC1O15118 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPC1O15118 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPC1O15118 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPC1O15118 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.96■■□□□ 1.11
NPC1O15118 AC079089.2-201ENST00000531211 1277 ntBASIC21.96■■□□□ 1.11
NPC1O15118 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.96■■□□□ 1.11
NPC1O15118 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.96■■□□□ 1.11
NPC1O15118 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.96■■□□□ 1.11
NPC1O15118 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.96■■□□□ 1.11
NPC1O15118 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
NPC1O15118 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPC1O15118 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPC1O15118 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPC1O15118 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPC1O15118 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.95■■□□□ 1.1
NPC1O15118 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPC1O15118 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPC1O15118 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPC1O15118 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.95■■□□□ 1.1
NPC1O15118 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC21.95■■□□□ 1.1
NPC1O15118 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NPC1O15118 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.95■■□□□ 1.1
NPC1O15118 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
NPC1O15118 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPC1O15118 KRT87P-202ENST00000534226 1464 ntBASIC21.95■■□□□ 1.1
NPC1O15118 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPC1O15118 LINC01960-201ENST00000563759 1884 ntBASIC21.94■■□□□ 1.1
NPC1O15118 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
NPC1O15118 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.94■■□□□ 1.1
NPC1O15118 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.94■■□□□ 1.1
NPC1O15118 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
NPC1O15118 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPC1O15118 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPC1O15118 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
NPC1O15118 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPC1O15118 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.94■■□□□ 1.1
NPC1O15118 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1O15118 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1O15118 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1O15118 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1O15118 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1O15118 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1O15118 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1O15118 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1O15118 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.93■■□□□ 1.1
NPC1O15118 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.93■■□□□ 1.1
NPC1O15118 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.93■■□□□ 1.1
NPC1O15118 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPC1O15118 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
NPC1O15118 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.92■■□□□ 1.1
NPC1O15118 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.92■■□□□ 1.1
NPC1O15118 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.92■■□□□ 1.1
NPC1O15118 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1O15118 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1O15118 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1O15118 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.92■■□□□ 1.1
NPC1O15118 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1O15118 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.92■■□□□ 1.1
NPC1O15118 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1O15118 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPC1O15118 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.91■■□□□ 1.1
NPC1O15118 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.91■■□□□ 1.1
NPC1O15118 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1O15118 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1O15118 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1O15118 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1O15118 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1O15118 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1O15118 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.91■■□□□ 1.1
NPC1O15118 AL034346.1-201ENST00000568244 1277 ntBASIC21.91■■□□□ 1.1
NPC1O15118 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1O15118 RAP2CP1-201ENST00000605103 478 ntBASIC21.91■■□□□ 1.1
NPC1O15118 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1O15118 AC073111.5-205ENST00000641717 521 ntBASIC21.91■■□□□ 1.1
NPC1O15118 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1O15118 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1O15118 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
NPC1O15118 ESRRAP2-201ENST00000418437 1549 ntBASIC21.9■■□□□ 1.1
NPC1O15118 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms