Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH17O14917 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH17O14917 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH17O14917 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH17O14917 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH17O14917 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDH17O14917 MIR572-201ENST00000384983 95 ntBASIC20.66■□□□□ 0.9
PCDH17O14917 AC097381.1-201ENST00000429019 1296 ntBASIC20.66■□□□□ 0.9
PCDH17O14917 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH17O14917 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
PCDH17O14917 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH17O14917 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH17O14917 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH17O14917 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH17O14917 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH17O14917 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH17O14917 AC127496.7-201ENST00000625110 1798 ntBASIC20.65■□□□□ 0.9
PCDH17O14917 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDH17O14917 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH17O14917 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH17O14917 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PCDH17O14917 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH17O14917 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH17O14917 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH17O14917 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.65■□□□□ 0.9
PCDH17O14917 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH17O14917 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH17O14917 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PCDH17O14917 AL354811.1-201ENST00000610286 706 ntBASIC20.64■□□□□ 0.89
PCDH17O14917 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH17O14917 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
PCDH17O14917 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH17O14917 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PCDH17O14917 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH17O14917 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PCDH17O14917 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PCDH17O14917 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.64■□□□□ 0.89
PCDH17O14917 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDH17O14917 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
PCDH17O14917 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH17O14917 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH17O14917 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH17O14917 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH17O14917 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH17O14917 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PCDH17O14917 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDH17O14917 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH17O14917 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH17O14917 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH17O14917 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH17O14917 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDH17O14917 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.63■□□□□ 0.89
PCDH17O14917 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.63■□□□□ 0.89
PCDH17O14917 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.63■□□□□ 0.89
PCDH17O14917 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH17O14917 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH17O14917 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH17O14917 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.63■□□□□ 0.89
PCDH17O14917 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PCDH17O14917 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PCDH17O14917 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.62■□□□□ 0.89
PCDH17O14917 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH17O14917 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH17O14917 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH17O14917 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.62■□□□□ 0.89
PCDH17O14917 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH17O14917 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH17O14917 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.62■□□□□ 0.89
PCDH17O14917 AC087239.1-201ENST00000622671 572 ntBASIC20.62■□□□□ 0.89
PCDH17O14917 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH17O14917 AL353803.4-201ENST00000565882 1934 ntBASIC20.62■□□□□ 0.89
PCDH17O14917 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
PCDH17O14917 ESRRAP2-201ENST00000418437 1549 ntBASIC20.62■□□□□ 0.89
PCDH17O14917 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH17O14917 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDH17O14917 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH17O14917 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH17O14917 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH17O14917 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.61■□□□□ 0.89
PCDH17O14917 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.61■□□□□ 0.89
PCDH17O14917 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.61■□□□□ 0.89
PCDH17O14917 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH17O14917 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.61■□□□□ 0.89
PCDH17O14917 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH17O14917 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PCDH17O14917 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PCDH17O14917 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PCDH17O14917 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH17O14917 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCDH17O14917 AC242852.2-201ENST00000615738 1807 ntBASIC20.6■□□□□ 0.89
PCDH17O14917 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
PCDH17O14917 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH17O14917 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH17O14917 AC010525.1-201ENST00000585559 441 ntBASIC20.6■□□□□ 0.89
PCDH17O14917 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH17O14917 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH17O14917 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PCDH17O14917 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.6■□□□□ 0.89
PCDH17O14917 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
PCDH17O14917 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms