Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC25.67■■□□□ 1.7
TMEM88BA6NKF7 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
TMEM88BA6NKF7 AC008694.1-202ENST00000636953 945 ntBASIC25.67■■□□□ 1.7
TMEM88BA6NKF7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
TMEM88BA6NKF7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
TMEM88BA6NKF7 MIR718-201ENST00000390190 70 ntBASIC25.66■■□□□ 1.7
TMEM88BA6NKF7 AC026366.1-201ENST00000488803 879 ntBASIC25.66■■□□□ 1.7
TMEM88BA6NKF7 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
TMEM88BA6NKF7 MIR4497-201ENST00000583208 89 ntBASIC25.66■■□□□ 1.7
TMEM88BA6NKF7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
TMEM88BA6NKF7 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
TMEM88BA6NKF7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TMEM88BA6NKF7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMEM88BA6NKF7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
TMEM88BA6NKF7 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMEM88BA6NKF7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
TMEM88BA6NKF7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMEM88BA6NKF7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC25.65■■□□□ 1.7
TMEM88BA6NKF7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC25.65■■□□□ 1.7
TMEM88BA6NKF7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC25.65■■□□□ 1.7
TMEM88BA6NKF7 REXO1L12P-201ENST00000622156 912 ntBASIC25.65■■□□□ 1.7
TMEM88BA6NKF7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
TMEM88BA6NKF7 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
TMEM88BA6NKF7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TMEM88BA6NKF7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TMEM88BA6NKF7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
TMEM88BA6NKF7 AC010141.2-201ENST00000452426 721 ntBASIC25.64■■□□□ 1.7
TMEM88BA6NKF7 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
TMEM88BA6NKF7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC25.64■■□□□ 1.7
TMEM88BA6NKF7 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC25.64■■□□□ 1.7
TMEM88BA6NKF7 AC016405.3-201ENST00000607710 860 ntBASIC25.64■■□□□ 1.7
TMEM88BA6NKF7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC25.64■■□□□ 1.7
TMEM88BA6NKF7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.69
TMEM88BA6NKF7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
TMEM88BA6NKF7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TMEM88BA6NKF7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
TMEM88BA6NKF7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 AC069236.1-201ENST00000604339 616 ntBASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
TMEM88BA6NKF7 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TMEM88BA6NKF7 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TMEM88BA6NKF7 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
TMEM88BA6NKF7 AC007322.4-201ENST00000509611 723 ntBASIC25.62■■□□□ 1.69
TMEM88BA6NKF7 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
TMEM88BA6NKF7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC25.62■■□□□ 1.69
TMEM88BA6NKF7 LINC01023-201ENST00000606054 436 ntBASIC25.62■■□□□ 1.69
TMEM88BA6NKF7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
TMEM88BA6NKF7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.62■■□□□ 1.69
TMEM88BA6NKF7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC25.62■■□□□ 1.69
TMEM88BA6NKF7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.61■■□□□ 1.69
TMEM88BA6NKF7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TMEM88BA6NKF7 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TMEM88BA6NKF7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TMEM88BA6NKF7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
TMEM88BA6NKF7 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC25.61■■□□□ 1.69
TMEM88BA6NKF7 AC091874.3-201ENST00000512672 1195 ntBASIC25.61■■□□□ 1.69
TMEM88BA6NKF7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC25.61■■□□□ 1.69
TMEM88BA6NKF7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
TMEM88BA6NKF7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TMEM88BA6NKF7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
TMEM88BA6NKF7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC25.6■■□□□ 1.69
TMEM88BA6NKF7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC25.6■■□□□ 1.69
TMEM88BA6NKF7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
TMEM88BA6NKF7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
TMEM88BA6NKF7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
TMEM88BA6NKF7 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.6■■□□□ 1.69
TMEM88BA6NKF7 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC25.6■■□□□ 1.69
TMEM88BA6NKF7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
TMEM88BA6NKF7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC25.6■■□□□ 1.69
TMEM88BA6NKF7 UNC93B5-201ENST00000530315 699 ntBASIC25.6■■□□□ 1.69
TMEM88BA6NKF7 AL359736.2-201ENST00000621992 437 ntBASIC25.6■■□□□ 1.69
TMEM88BA6NKF7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
TMEM88BA6NKF7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 KRT18P21-201ENST00000515767 1272 ntBASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 AC138907.5-202ENST00000569484 235 ntBASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
TMEM88BA6NKF7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC25.59■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms