Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RBFOX3A6NFN3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.11■□□□□ 0.33
RBFOX3A6NFN3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
RBFOX3A6NFN3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.1■□□□□ 0.33
RBFOX3A6NFN3 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBFOX3A6NFN3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBFOX3A6NFN3 FEM1AP1-201ENST00000431297 1995 ntBASIC17.1■□□□□ 0.33
RBFOX3A6NFN3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.1■□□□□ 0.33
RBFOX3A6NFN3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBFOX3A6NFN3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.1■□□□□ 0.33
RBFOX3A6NFN3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RBFOX3A6NFN3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RBFOX3A6NFN3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
RBFOX3A6NFN3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.1■□□□□ 0.33
RBFOX3A6NFN3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.1■□□□□ 0.33
RBFOX3A6NFN3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RBFOX3A6NFN3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.1■□□□□ 0.33
RBFOX3A6NFN3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 RP9P-202ENST00000450133 1212 ntBASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 AC144652.1-201ENST00000609974 1624 ntBASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.09■□□□□ 0.33
RBFOX3A6NFN3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.08■□□□□ 0.33
RBFOX3A6NFN3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.08■□□□□ 0.33
RBFOX3A6NFN3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.08■□□□□ 0.32
RBFOX3A6NFN3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RBFOX3A6NFN3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RBFOX3A6NFN3 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.08■□□□□ 0.32
RBFOX3A6NFN3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RBFOX3A6NFN3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.08■□□□□ 0.32
RBFOX3A6NFN3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
RBFOX3A6NFN3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
RBFOX3A6NFN3 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RBFOX3A6NFN3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RBFOX3A6NFN3 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 AC131274.2-201ENST00000580697 1507 ntBASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.07■□□□□ 0.32
RBFOX3A6NFN3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.06■□□□□ 0.32
RBFOX3A6NFN3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms