Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.61■■□□□ 1.05
CCDC189A1A4V9 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC189A1A4V9 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCDC189A1A4V9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 AL451085.2-201ENST00000605085 799 ntBASIC21.6■■□□□ 1.05
CCDC189A1A4V9 AC241377.3-202ENST00000626088 1088 ntBASIC21.6■■□□□ 1.05
CCDC189A1A4V9 AC241585.3-202ENST00000628937 1088 ntBASIC21.6■■□□□ 1.05
CCDC189A1A4V9 AC245100.8-202ENST00000629247 1058 ntBASIC21.6■■□□□ 1.05
CCDC189A1A4V9 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CCDC189A1A4V9 AC080038.3-201ENST00000623346 1952 ntBASIC21.59■■□□□ 1.05
CCDC189A1A4V9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC189A1A4V9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC189A1A4V9 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CCDC189A1A4V9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.59■■□□□ 1.05
CCDC189A1A4V9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC189A1A4V9 CA15P2-201ENST00000611168 834 ntBASIC21.59■■□□□ 1.05
CCDC189A1A4V9 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC189A1A4V9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC189A1A4V9 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.59■■□□□ 1.05
CCDC189A1A4V9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC189A1A4V9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCDC189A1A4V9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC189A1A4V9 LINC01960-201ENST00000563759 1884 ntBASIC21.58■■□□□ 1.05
CCDC189A1A4V9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC189A1A4V9 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CCDC189A1A4V9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC189A1A4V9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CCDC189A1A4V9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CCDC189A1A4V9 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC189A1A4V9 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
CCDC189A1A4V9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.58■■□□□ 1.05
CCDC189A1A4V9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC189A1A4V9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC189A1A4V9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC189A1A4V9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC189A1A4V9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC189A1A4V9 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC189A1A4V9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC189A1A4V9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 TSPY9P-201ENST00000440215 945 ntBASIC21.57■■□□□ 1.04
CCDC189A1A4V9 TSPY11P-201ENST00000442607 1045 ntBASIC21.57■■□□□ 1.04
CCDC189A1A4V9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC189A1A4V9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC189A1A4V9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC189A1A4V9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC189A1A4V9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC189A1A4V9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC189A1A4V9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CCDC189A1A4V9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC189A1A4V9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC189A1A4V9 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC189A1A4V9 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC189A1A4V9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC189A1A4V9 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC189A1A4V9 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC189A1A4V9 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC189A1A4V9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC189A1A4V9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC189A1A4V9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CCDC189A1A4V9 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC189A1A4V9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC189A1A4V9 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC189A1A4V9 AL117332.1-201ENST00000622628 974 ntBASIC21.55■■□□□ 1.04
CCDC189A1A4V9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC189A1A4V9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCDC189A1A4V9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC189A1A4V9 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CCDC189A1A4V9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
CCDC189A1A4V9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms