Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 PVT1_1.1-201ENST00000615125 194 ntBASIC18.93■□□□□ 0.62
SHISA3A0PJX4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SHISA3A0PJX4 AC004687.1-201ENST00000579003 1625 ntBASIC18.92■□□□□ 0.62
SHISA3A0PJX4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 AC139795.1-202ENST00000500444 432 ntBASIC18.92■□□□□ 0.62
SHISA3A0PJX4 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 DUX4L18-201ENST00000553347 1267 ntBASIC18.92■□□□□ 0.62
SHISA3A0PJX4 DUX4L4-201ENST00000566884 1269 ntBASIC18.92■□□□□ 0.62
SHISA3A0PJX4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SHISA3A0PJX4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SHISA3A0PJX4 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.9■□□□□ 0.62
SHISA3A0PJX4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
SHISA3A0PJX4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SHISA3A0PJX4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
SHISA3A0PJX4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SHISA3A0PJX4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHISA3A0PJX4 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.89■□□□□ 0.61
SHISA3A0PJX4 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.89■□□□□ 0.61
SHISA3A0PJX4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.89■□□□□ 0.61
SHISA3A0PJX4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHISA3A0PJX4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHISA3A0PJX4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHISA3A0PJX4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHISA3A0PJX4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHISA3A0PJX4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHISA3A0PJX4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SHISA3A0PJX4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SHISA3A0PJX4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SHISA3A0PJX4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.88■□□□□ 0.61
SHISA3A0PJX4 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHISA3A0PJX4 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SHISA3A0PJX4 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHISA3A0PJX4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.88■□□□□ 0.61
SHISA3A0PJX4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHISA3A0PJX4 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SHISA3A0PJX4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms