Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TCRBV3S1A0A5B6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TCRBV3S1A0A5B6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.33■□□□□ 0.85
TCRBV3S1A0A5B6 LINC01006-201ENST00000333319 2292 ntBASIC20.33■□□□□ 0.85
TCRBV3S1A0A5B6 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
TCRBV3S1A0A5B6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.85
TCRBV3S1A0A5B6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TCRBV3S1A0A5B6 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
TCRBV3S1A0A5B6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.33■□□□□ 0.85
TCRBV3S1A0A5B6 SNX5-217ENST00000606557 1087 ntBASIC20.33■□□□□ 0.85
TCRBV3S1A0A5B6 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
TCRBV3S1A0A5B6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
TCRBV3S1A0A5B6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.33■□□□□ 0.84
TCRBV3S1A0A5B6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TCRBV3S1A0A5B6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
TCRBV3S1A0A5B6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.32■□□□□ 0.84
TCRBV3S1A0A5B6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
TCRBV3S1A0A5B6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC20.32■□□□□ 0.84
TCRBV3S1A0A5B6 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV3S1A0A5B6 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
TCRBV3S1A0A5B6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV3S1A0A5B6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV3S1A0A5B6 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TCRBV3S1A0A5B6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV3S1A0A5B6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TCRBV3S1A0A5B6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TCRBV3S1A0A5B6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV3S1A0A5B6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV3S1A0A5B6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.31■□□□□ 0.84
TCRBV3S1A0A5B6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV3S1A0A5B6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV3S1A0A5B6 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV3S1A0A5B6 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.31■□□□□ 0.84
TCRBV3S1A0A5B6 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV3S1A0A5B6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV3S1A0A5B6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TCRBV3S1A0A5B6 AC004687.1-201ENST00000579003 1625 ntBASIC20.31■□□□□ 0.84
TCRBV3S1A0A5B6 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV3S1A0A5B6 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.3■□□□□ 0.84
TCRBV3S1A0A5B6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.3■□□□□ 0.84
TCRBV3S1A0A5B6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
TCRBV3S1A0A5B6 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.3■□□□□ 0.84
TCRBV3S1A0A5B6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV3S1A0A5B6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.3■□□□□ 0.84
TCRBV3S1A0A5B6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV3S1A0A5B6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV3S1A0A5B6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TCRBV3S1A0A5B6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV3S1A0A5B6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TCRBV3S1A0A5B6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TCRBV3S1A0A5B6 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 U85056.1-201ENST00000616429 682 ntBASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TCRBV3S1A0A5B6 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TCRBV3S1A0A5B6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.27■□□□□ 0.84
TCRBV3S1A0A5B6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.27■□□□□ 0.84
TCRBV3S1A0A5B6 FEM1AP1-201ENST00000431297 1995 ntBASIC20.27■□□□□ 0.84
TCRBV3S1A0A5B6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV3S1A0A5B6 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV3S1A0A5B6 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV3S1A0A5B6 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.27■□□□□ 0.84
TCRBV3S1A0A5B6 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV3S1A0A5B6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.27■□□□□ 0.84
TCRBV3S1A0A5B6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV3S1A0A5B6 AC139795.1-202ENST00000500444 432 ntBASIC20.27■□□□□ 0.84
TCRBV3S1A0A5B6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.27■□□□□ 0.84
TCRBV3S1A0A5B6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV3S1A0A5B6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TCRBV3S1A0A5B6 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms