Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
A0A1W2PRF3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
A0A1W2PRF3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
A0A1W2PRF3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.78■□□□□ 0.44
A0A1W2PRF3 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
A0A1W2PRF3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
A0A1W2PRF3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
A0A1W2PRF3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.77■□□□□ 0.44
A0A1W2PRF3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
A0A1W2PRF3 USP45-205ENST00000472914 1617 ntTSL 5 BASIC17.77■□□□□ 0.44
A0A1W2PRF3 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
A0A1W2PRF3 AL031602.1-201ENST00000633169 911 ntBASIC17.77■□□□□ 0.44
A0A1W2PRF3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
A0A1W2PRF3 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.77■□□□□ 0.44
A0A1W2PRF3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.77■□□□□ 0.44
A0A1W2PRF3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
A0A1W2PRF3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
A0A1W2PRF3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
A0A1W2PRF3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
A0A1W2PRF3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
A0A1W2PRF3 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
A0A1W2PRF3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.76■□□□□ 0.43
A0A1W2PRF3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
A0A1W2PRF3 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
A0A1W2PRF3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.76■□□□□ 0.43
A0A1W2PRF3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
A0A1W2PRF3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
A0A1W2PRF3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
A0A1W2PRF3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
A0A1W2PRF3 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
A0A1W2PRF3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC17.76■□□□□ 0.43
A0A1W2PRF3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
A0A1W2PRF3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
A0A1W2PRF3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.75■□□□□ 0.43
A0A1W2PRF3 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.75■□□□□ 0.43
A0A1W2PRF3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.75■□□□□ 0.43
A0A1W2PRF3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
A0A1W2PRF3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.75■□□□□ 0.43
A0A1W2PRF3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC17.75■□□□□ 0.43
A0A1W2PRF3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.75■□□□□ 0.43
A0A1W2PRF3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.75■□□□□ 0.43
A0A1W2PRF3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC17.75■□□□□ 0.43
A0A1W2PRF3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.75■□□□□ 0.43
A0A1W2PRF3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.75■□□□□ 0.43
A0A1W2PRF3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.75■□□□□ 0.43
A0A1W2PRF3 AC068587.7-201ENST00000641602 218 ntBASIC17.75■□□□□ 0.43
A0A1W2PRF3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
A0A1W2PRF3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
A0A1W2PRF3 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
A0A1W2PRF3 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
A0A1W2PRF3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
A0A1W2PRF3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC17.74■□□□□ 0.43
A0A1W2PRF3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
A0A1W2PRF3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.74■□□□□ 0.43
A0A1W2PRF3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
A0A1W2PRF3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.74■□□□□ 0.43
A0A1W2PRF3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC17.74■□□□□ 0.43
A0A1W2PRF3 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.74■□□□□ 0.43
A0A1W2PRF3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.74■□□□□ 0.43
A0A1W2PRF3 AL358852.1-201ENST00000623174 1268 ntBASIC17.74■□□□□ 0.43
A0A1W2PRF3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
A0A1W2PRF3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
A0A1W2PRF3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
A0A1W2PRF3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
A0A1W2PRF3 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
A0A1W2PRF3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
A0A1W2PRF3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 AC133561.1-201ENST00000568600 2415 ntBASIC17.73■□□□□ 0.43
A0A1W2PRF3 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
A0A1W2PRF3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
A0A1W2PRF3 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
A0A1W2PRF3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
A0A1W2PRF3 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
A0A1W2PRF3 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
A0A1W2PRF3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
A0A1W2PRF3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
A0A1W2PRF3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
A0A1W2PRF3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
A0A1W2PRF3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.72■□□□□ 0.43
A0A1W2PRF3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.72■□□□□ 0.43
A0A1W2PRF3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
A0A1W2PRF3 AL354811.1-201ENST00000610286 706 ntBASIC17.72■□□□□ 0.43
A0A1W2PRF3 MIR5787-201ENST00000611784 55 ntBASIC17.72■□□□□ 0.43
A0A1W2PRF3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
A0A1W2PRF3 C1orf229-201ENST00000623686 2258 ntBASIC17.72■□□□□ 0.43
A0A1W2PRF3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms