Protein–RNA interactions for Protein: A0A0K0K1A5

TRBV6-5, T-cell receptor beta variable 6-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-5A0A0K0K1A5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
TRBV6-5A0A0K0K1A5 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.36■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-5A0A0K0K1A5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TRBV6-5A0A0K0K1A5 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-5A0A0K0K1A5 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-5A0A0K0K1A5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-5A0A0K0K1A5 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC15.33■□□□□ 0.05
TRBV6-5A0A0K0K1A5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-5A0A0K0K1A5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-5A0A0K0K1A5 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-5A0A0K0K1A5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-5A0A0K0K1A5 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 TSPY13P-201ENST00000338964 914 ntBASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 AC073130.3-201ENST00000624389 2278 ntBASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-5A0A0K0K1A5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 AC104564.3-201ENST00000582367 638 ntBASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 LINC01521-201ENST00000504184 1943 ntBASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRBV6-5A0A0K0K1A5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRBV6-5A0A0K0K1A5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRBV6-5A0A0K0K1A5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRBV6-5A0A0K0K1A5 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms