Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 AC016769.1-201ENST00000409132 1010 ntBASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 RARRES2P11-201ENST00000635158 484 ntBASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV10A0A0B4J240 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV10A0A0B4J240 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
TRAV10A0A0B4J240 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
TRAV10A0A0B4J240 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAV10A0A0B4J240 AC004911.1-201ENST00000416316 871 ntBASIC15.3■□□□□ 0.04
TRAV10A0A0B4J240 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV10A0A0B4J240 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC15.3■□□□□ 0.04
TRAV10A0A0B4J240 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.3■□□□□ 0.04
TRAV10A0A0B4J240 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV10A0A0B4J240 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
TRAV10A0A0B4J240 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 AC079140.4-201ENST00000507448 529 ntBASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 AC137761.2-201ENST00000561729 223 ntBASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 AC145350.3-201ENST00000569033 163 ntBASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TRAV10A0A0B4J240 AC009237.3-201ENST00000393279 1427 ntBASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 KRT19P1-201ENST00000405746 1186 ntBASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 AC090192.1-201ENST00000517740 490 ntBASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 AC092437.1-201ENST00000624794 1048 ntBASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TRAV10A0A0B4J240 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV10A0A0B4J240 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV10A0A0B4J240 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.27■□□□□ 0.04
TRAV10A0A0B4J240 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV10A0A0B4J240 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
TRAV10A0A0B4J240 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TRAV10A0A0B4J240 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV10A0A0B4J240 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.27■□□□□ 0.04
TRAV10A0A0B4J240 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC15.27■□□□□ 0.04
TRAV10A0A0B4J240 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV10A0A0B4J240 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV10A0A0B4J240 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV10A0A0B4J240 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.27■□□□□ 0.03
TRAV10A0A0B4J240 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV10A0A0B4J240 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TRAV10A0A0B4J240 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
TRAV10A0A0B4J240 LINC01960-201ENST00000563759 1884 ntBASIC15.27■□□□□ 0.03
TRAV10A0A0B4J240 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TRAV10A0A0B4J240 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV10A0A0B4J240 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV10A0A0B4J240 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV10A0A0B4J240 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV10A0A0B4J240 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TRAV10A0A0B4J240 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.26■□□□□ 0.03
TRAV10A0A0B4J240 DLX3-202ENST00000512495 834 ntTSL 2 BASIC15.26■□□□□ 0.03
TRAV10A0A0B4J240 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms