Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV13-2A0A0B4J235 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
TRAV13-2A0A0B4J235 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV13-2A0A0B4J235 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRAV13-2A0A0B4J235 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-2A0A0B4J235 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-2A0A0B4J235 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-2A0A0B4J235 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC14.3□□□□□ -0.12
TRAV13-2A0A0B4J235 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC14.3□□□□□ -0.12
TRAV13-2A0A0B4J235 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-2A0A0B4J235 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-2A0A0B4J235 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
TRAV13-2A0A0B4J235 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TRAV13-2A0A0B4J235 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-2A0A0B4J235 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-2A0A0B4J235 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-2A0A0B4J235 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TRAV13-2A0A0B4J235 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-2A0A0B4J235 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-2A0A0B4J235 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV13-2A0A0B4J235 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-2A0A0B4J235 TUB-203ENST00000534099 1759 ntTSL 2 BASIC14.29□□□□□ -0.12
TRAV13-2A0A0B4J235 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-2A0A0B4J235 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TRAV13-2A0A0B4J235 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 AC060814.1-201ENST00000554326 538 ntBASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAV13-2A0A0B4J235 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV13-2A0A0B4J235 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV13-2A0A0B4J235 AL157384.1-201ENST00000445995 2473 ntBASIC14.27□□□□□ -0.13
TRAV13-2A0A0B4J235 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV13-2A0A0B4J235 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV13-2A0A0B4J235 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TRAV13-2A0A0B4J235 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV13-2A0A0B4J235 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV13-2A0A0B4J235 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV13-2A0A0B4J235 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV13-2A0A0B4J235 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
TRAV13-2A0A0B4J235 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 AC131274.2-201ENST00000580697 1507 ntBASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 ECEL1P2-201ENST00000461596 1295 ntBASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV13-2A0A0B4J235 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms