Protein–RNA interactions for Protein: A0A0A6YYJ0

MSANTD3-TMEFF1, Protein MSANTD3-TMEFF1, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSANTD3-TMEFF1A0A0A6YYJ0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.57■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 AC066615.1-201ENST00000640911 628 ntBASIC21.57■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.56■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.56■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 SLC29A4P1-201ENST00000398760 971 ntBASIC21.56■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.56■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.56■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.56■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.56■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.55■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.55■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.55■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.55■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.55■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 AP001160.3-201ENST00000601484 763 ntBASIC21.55■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 AL139125.2-201ENST00000623134 1869 ntBASIC21.54■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.54■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.54■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.54■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 MYCNOS-205ENST00000641950 531 ntBASIC21.54■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.54■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.53■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.52■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.52■■□□□ 1.04
MSANTD3-TMEFF1A0A0A6YYJ0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.51■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.51■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.51■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 MIR4651-201ENST00000582622 73 ntBASIC21.51■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.51■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.51■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.51■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
MSANTD3-TMEFF1A0A0A6YYJ0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms