Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 RASGEF1B-201ENST00000264400 2277 ntAPPRIS P3 TSL 2 BASIC11.75□□□□□ -0.53
SCN2BO60939 AL512310.7-201ENST00000547785 2268 ntBASIC11.75□□□□□ -0.53
SCN2BO60939 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 SPOCK3-203ENST00000421836 3061 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
SCN2BO60939 PIGN-214ENST00000589720 1853 ntTSL 2 BASIC11.75□□□□□ -0.53
SCN2BO60939 AC020912.1-201ENST00000638312 5059 ntTSL 5 BASIC11.75□□□□□ -0.53
SCN2BO60939 PARG-207ENST00000616448 3197 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC11.75□□□□□ -0.53
SCN2BO60939 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC11.75□□□□□ -0.53
SCN2BO60939 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC11.75□□□□□ -0.53
SCN2BO60939 RBMX2P5-201ENST00000424312 969 ntBASIC11.75□□□□□ -0.53
SCN2BO60939 AC099681.2-201ENST00000449899 543 ntTSL 4 BASIC11.75□□□□□ -0.53
SCN2BO60939 AC007405.2-203ENST00000455988 547 ntTSL 4 BASIC11.75□□□□□ -0.53
SCN2BO60939 KRT18P42-201ENST00000505048 1255 ntBASIC11.75□□□□□ -0.53
SCN2BO60939 AC022447.7-201ENST00000509629 435 ntBASIC11.75□□□□□ -0.53
SCN2BO60939 SAA2-SAA4-201ENST00000524555 743 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
SCN2BO60939 SAA2-204ENST00000528349 948 ntTSL 2 BASIC11.75□□□□□ -0.53
SCN2BO60939 KNOP1P1-201ENST00000542108 989 ntBASIC11.75□□□□□ -0.53
SCN2BO60939 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC11.75□□□□□ -0.53
SCN2BO60939 GSKIP-203ENST00000554182 760 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SCN2BO60939 AC104759.1-201ENST00000559109 939 ntBASIC11.75□□□□□ -0.53
SCN2BO60939 AC233702.8-201ENST00000579239 965 ntTSL 3 BASIC11.75□□□□□ -0.53
SCN2BO60939 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC11.75□□□□□ -0.53
SCN2BO60939 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
SCN2BO60939 PLIN5-206ENST00000592610 1903 ntBASIC11.75□□□□□ -0.53
SCN2BO60939 GRID1-201ENST00000327946 5834 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SCN2BO60939 MAN2C1-201ENST00000267978 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 JAK3-204ENST00000527670 3996 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 TMEM18-201ENST00000281017 2762 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 LIN54-206ENST00000506560 2757 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 SNX16-203ENST00000396330 3452 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
SCN2BO60939 ZNF567-202ENST00000536254 2825 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
SCN2BO60939 ORC5-203ENST00000447452 1409 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 RALA-201ENST00000005257 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 AC004585.2-201ENST00000624090 1473 ntBASIC11.75□□□□□ -0.53
SCN2BO60939 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 WDSUB1-204ENST00000409124 1600 ntTSL 5 BASIC11.75□□□□□ -0.53
SCN2BO60939 PCYT1B-202ENST00000379144 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
SCN2BO60939 AF131215.4-201ENST00000526648 1741 ntTSL 5 BASIC11.74□□□□□ -0.53
SCN2BO60939 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 AP000350.6-201ENST00000609510 5637 ntBASIC11.74□□□□□ -0.53
SCN2BO60939 STARD13-201ENST00000255486 5798 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 STARD13-204ENST00000399365 5784 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 PIAS3-203ENST00000393045 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 PRIMPOL-209ENST00000512834 2174 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 PRICKLE1-209ENST00000552240 3311 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SCN2BO60939 KRIT1-201ENST00000340022 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 PADI6-201ENST00000619609 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC11.74□□□□□ -0.53
SCN2BO60939 DQX1-201ENST00000393951 2540 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SCN2BO60939 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SCN2BO60939 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC11.74□□□□□ -0.53
SCN2BO60939 AC009237.11-201ENST00000425635 265 ntBASIC11.74□□□□□ -0.53
SCN2BO60939 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC11.74□□□□□ -0.53
SCN2BO60939 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC11.74□□□□□ -0.53
SCN2BO60939 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC11.74□□□□□ -0.53
SCN2BO60939 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC11.74□□□□□ -0.53
SCN2BO60939 AC018892.1-201ENST00000451098 265 ntBASIC11.74□□□□□ -0.53
SCN2BO60939 AL451000.1-201ENST00000451300 1186 ntBASIC11.74□□□□□ -0.53
SCN2BO60939 AC092896.1-201ENST00000465850 380 ntBASIC11.74□□□□□ -0.53
SCN2BO60939 AK2-206ENST00000480134 811 ntTSL 2 BASIC11.74□□□□□ -0.53
SCN2BO60939 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 ZNF175-203ENST00000545217 1239 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 AC019254.1-202ENST00000558515 645 ntTSL 3 BASIC11.74□□□□□ -0.53
SCN2BO60939 ELP5-210ENST00000573657 687 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 THY1-209ENST00000580275 578 ntTSL 3 BASIC11.74□□□□□ -0.53
SCN2BO60939 AC012313.2-201ENST00000599952 1154 ntTSL 5 BASIC11.74□□□□□ -0.53
SCN2BO60939 AC087163.3-201ENST00000624345 700 ntBASIC11.74□□□□□ -0.53
SCN2BO60939 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 KANSL1-208ENST00000574590 5147 ntAPPRIS ALT1 TSL 2 BASIC11.74□□□□□ -0.53
SCN2BO60939 HLA-DOB-206ENST00000438763 1372 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SCN2BO60939 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC11.74□□□□□ -0.53
SCN2BO60939 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 GSTM5-201ENST00000256593 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 STYX-201ENST00000354586 4857 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 TMF1-201ENST00000398559 6849 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 GDF9-207ENST00000624495 1799 ntTSL 2 BASIC11.74□□□□□ -0.53
SCN2BO60939 ATP4A-201ENST00000262623 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 CEP89-201ENST00000305768 5678 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 TMCO1-202ENST00000392129 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 CEP57L1-204ENST00000407272 1947 ntTSL 5 BASIC11.74□□□□□ -0.53
SCN2BO60939 LPIN3-201ENST00000373257 4363 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SCN2BO60939 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SCN2BO60939 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SCN2BO60939 SLC18A1-201ENST00000265808 2770 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 ISM2-202ENST00000342219 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 PKD2L1-201ENST00000318222 3043 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SCN2BO60939 TJP2-201ENST00000348208 4058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms