Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.35□□□□□ -0.59
P04436 FBLN2-201ENST00000295760 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 TMEM185A-210ENST00000613273 1913 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 IQCC-201ENST00000291358 2027 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.35□□□□□ -0.59
P04436 C6orf163-203ENST00000608326 2110 ntTSL 2 BASIC11.35□□□□□ -0.59
P04436 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
P04436 TRO-202ENST00000319167 2326 ntAPPRIS ALT2 TSL 2 BASIC11.35□□□□□ -0.59
P04436 TRO-203ENST00000375022 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
P04436 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC11.35□□□□□ -0.59
P04436 AC096564.1-201ENST00000499098 2810 ntTSL 2 BASIC11.35□□□□□ -0.59
P04436 GGTA1P-202ENST00000481534 3429 ntTSL 2 BASIC11.35□□□□□ -0.59
P04436 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 TBC1D3P3-201ENST00000342824 1080 ntBASIC11.35□□□□□ -0.59
P04436 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
P04436 HLA-DQB1-203ENST00000399082 1219 ntBASIC11.35□□□□□ -0.59
P04436 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC11.35□□□□□ -0.59
P04436 PHBP3-201ENST00000412562 819 ntBASIC11.35□□□□□ -0.59
P04436 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC11.35□□□□□ -0.59
P04436 MRO-205ENST00000436348 1125 ntTSL 5 BASIC11.35□□□□□ -0.59
P04436 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC11.35□□□□□ -0.59
P04436 HNRNPA1P30-202ENST00000440699 997 ntBASIC11.35□□□□□ -0.59
P04436 RN7SL111P-201ENST00000468841 285 ntBASIC11.35□□□□□ -0.59
P04436 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC11.35□□□□□ -0.59
P04436 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC11.35□□□□□ -0.59
P04436 EEF1GP2-201ENST00000509352 1243 ntBASIC11.35□□□□□ -0.59
P04436 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC11.35□□□□□ -0.59
P04436 AC108082.1-201ENST00000510857 331 ntBASIC11.35□□□□□ -0.59
P04436 FGL1-206ENST00000518650 1093 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P04436 KHDRBS3-206ENST00000520981 1243 ntTSL 5 BASIC11.35□□□□□ -0.59
P04436 AKR1B1P3-201ENST00000525311 588 ntBASIC11.35□□□□□ -0.59
P04436 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC11.35□□□□□ -0.59
P04436 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 BORCS5-203ENST00000542728 580 ntTSL 3 BASIC11.35□□□□□ -0.59
P04436 AP000812.3-201ENST00000544535 609 ntBASIC11.35□□□□□ -0.59
P04436 PMEL-214ENST00000550447 901 ntTSL 3 BASIC11.35□□□□□ -0.59
P04436 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC11.35□□□□□ -0.59
P04436 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
P04436 TIMM23-201ENST00000580018 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 RN7SL750P-201ENST00000582814 238 ntBASIC11.35□□□□□ -0.59
P04436 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC11.35□□□□□ -0.59
P04436 AC092329.1-201ENST00000594653 574 ntTSL 5 BASIC11.35□□□□□ -0.59
P04436 CYP17A1-205ENST00000638272 1227 ntTSL 5 BASIC11.35□□□□□ -0.59
P04436 AC010148.1-203ENST00000413842 1652 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 WASH2P-201ENST00000453662 1684 ntBASIC11.35□□□□□ -0.59
P04436 CLK4-208ENST00000520957 1690 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 TRNT1-202ENST00000280591 2180 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 HPGD-214ENST00000542498 2786 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
P04436 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC11.35□□□□□ -0.59
P04436 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
P04436 EME1-201ENST00000338165 2339 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
P04436 MORN4-203ENST00000478953 2225 ntTSL 2 BASIC11.35□□□□□ -0.59
P04436 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 ENO4-203ENST00000409522 1840 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 POTEB-202ENST00000439682 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 NIF3L1-201ENST00000359683 1626 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 SCML4-204ENST00000369025 1534 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
P04436 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC11.34□□□□□ -0.59
P04436 AOC2-201ENST00000253799 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04436 IGSF3-202ENST00000369483 7326 ntAPPRIS P4 TSL 5 BASIC11.34□□□□□ -0.59
P04436 KIAA0319L-202ENST00000373266 2377 ntTSL 5 BASIC11.34□□□□□ -0.59
P04436 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
P04436 ERN2-201ENST00000256797 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04436 SATB2-AS1-205ENST00000450728 3314 ntTSL 2 BASIC11.34□□□□□ -0.59
P04436 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04436 AC020928.1-201ENST00000590750 1850 ntTSL 2 BASIC11.34□□□□□ -0.59
P04436 AC073263.2-201ENST00000624835 1863 ntBASIC11.34□□□□□ -0.59
P04436 PRAMEF12-201ENST00000357726 1786 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
P04436 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P04436 CCDC144NL-AS1-216ENST00000582583 1670 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
P04436 HERC6-201ENST00000264346 3779 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04436 C10orf128-203ENST00000374153 1569 ntAPPRIS ALT2 TSL 3 BASIC11.34□□□□□ -0.59
P04436 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04436 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
P04436 GLDC-216ENST00000639639 1559 ntTSL 3 BASIC11.34□□□□□ -0.59
P04436 FXYD2-201ENST00000260287 513 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04436 TFAM-201ENST00000373895 973 ntTSL 2 BASIC11.34□□□□□ -0.59
P04436 NANOGNB-201ENST00000382119 907 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
P04436 ATXN8OS-201ENST00000414504 1148 ntTSL 5 BASIC11.34□□□□□ -0.59
P04436 AC026884.1-201ENST00000418296 457 ntBASIC11.34□□□□□ -0.59
P04436 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC11.34□□□□□ -0.59
P04436 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC11.34□□□□□ -0.59
P04436 TGIF2P1-201ENST00000435390 685 ntBASIC11.34□□□□□ -0.59
P04436 AC096540.1-201ENST00000436207 661 ntTSL 5 BASIC11.34□□□□□ -0.59
P04436 AC105446.1-201ENST00000441882 407 ntTSL 3 BASIC11.34□□□□□ -0.59
P04436 AL669970.2-201ENST00000446184 280 ntTSL 3 BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms