Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 CD209-202ENST00000315591 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 MIR497-201ENST00000385056 112 ntBASIC13.02□□□□□ -0.33
SLC1A1P43005 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SLC1A1P43005 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.33
SLC1A1P43005 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC13.02□□□□□ -0.33
SLC1A1P43005 MPRIPP1-201ENST00000452433 1089 ntBASIC13.02□□□□□ -0.33
SLC1A1P43005 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.02□□□□□ -0.33
SLC1A1P43005 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC13.02□□□□□ -0.33
SLC1A1P43005 AC004801.1-201ENST00000549557 360 ntBASIC13.02□□□□□ -0.33
SLC1A1P43005 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC13.02□□□□□ -0.33
SLC1A1P43005 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC13.02□□□□□ -0.33
SLC1A1P43005 TMEM159-204ENST00000572258 584 ntTSL 3 BASIC13.02□□□□□ -0.33
SLC1A1P43005 MIR5572-201ENST00000583188 137 ntBASIC13.02□□□□□ -0.33
SLC1A1P43005 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 AC092073.1-202ENST00000606020 653 ntTSL 3 BASIC13.02□□□□□ -0.33
SLC1A1P43005 AC080013.5-201ENST00000607044 679 ntBASIC13.02□□□□□ -0.33
SLC1A1P43005 AC006986.1-201ENST00000612764 241 ntBASIC13.02□□□□□ -0.33
SLC1A1P43005 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
SLC1A1P43005 NBR1-205ENST00000589872 3097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC13.02□□□□□ -0.33
SLC1A1P43005 AC092978.1-202ENST00000637590 1327 ntBASIC13.02□□□□□ -0.33
SLC1A1P43005 AC006037.2-201ENST00000622975 2232 ntBASIC13.02□□□□□ -0.33
SLC1A1P43005 TMEM159-203ENST00000451578 1378 ntTSL 2 BASIC13.02□□□□□ -0.33
SLC1A1P43005 AC011487.2-202ENST00000599707 1356 ntBASIC13.02□□□□□ -0.33
SLC1A1P43005 CAST-233ENST00000510756 2310 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SLC1A1P43005 FYN-203ENST00000368667 2416 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
SLC1A1P43005 SEC14L2-214ENST00000615189 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 LINC02154-201ENST00000412485 1497 ntTSL 2 BASIC13.02□□□□□ -0.33
SLC1A1P43005 KNSTRN-203ENST00000448395 1464 ntTSL 2 BASIC13.02□□□□□ -0.33
SLC1A1P43005 AC010201.2-201ENST00000605595 1495 ntBASIC13.02□□□□□ -0.33
SLC1A1P43005 DCAF6-204ENST00000432587 3522 ntTSL 2 BASIC13.02□□□□□ -0.33
SLC1A1P43005 HOPX-205ENST00000420433 1543 ntTSL 5 BASIC13.02□□□□□ -0.33
SLC1A1P43005 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 GRAMD1B-215ENST00000638086 2665 ntTSL 5 BASIC13.02□□□□□ -0.33
SLC1A1P43005 GABPB1-203ENST00000380877 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
SLC1A1P43005 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC13.02□□□□□ -0.33
SLC1A1P43005 AC096637.2-202ENST00000421933 1846 ntTSL 2 BASIC13.02□□□□□ -0.33
SLC1A1P43005 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
SLC1A1P43005 PRPF40B-202ENST00000380281 3154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SLC1A1P43005 NOL10-201ENST00000345985 3333 ntTSL 2 BASIC13.01□□□□□ -0.33
SLC1A1P43005 UBTFL8-201ENST00000426903 2112 ntBASIC13.01□□□□□ -0.33
SLC1A1P43005 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
SLC1A1P43005 CD83-202ENST00000612003 2307 ntTSL 4 BASIC13.01□□□□□ -0.33
SLC1A1P43005 KRBA1-201ENST00000319551 4020 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 BIRC2-213ENST00000613397 4066 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 WASHC2A-201ENST00000282633 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
SLC1A1P43005 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SLC1A1P43005 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 FGD3-202ENST00000375482 3321 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 OSBPL7-202ENST00000392507 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 NANOGNB-201ENST00000382119 907 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 MIR566-201ENST00000385187 94 ntBASIC13.01□□□□□ -0.33
SLC1A1P43005 HLA-DRA-202ENST00000395388 1280 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SLC1A1P43005 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC13.01□□□□□ -0.33
SLC1A1P43005 AC092570.1-201ENST00000414446 469 ntBASIC13.01□□□□□ -0.33
SLC1A1P43005 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC13.01□□□□□ -0.33
SLC1A1P43005 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC13.01□□□□□ -0.33
SLC1A1P43005 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 AP000911.1-205ENST00000527712 594 ntTSL 4 BASIC13.01□□□□□ -0.33
SLC1A1P43005 ORMDL2-204ENST00000550836 438 ntTSL 3 BASIC13.01□□□□□ -0.33
SLC1A1P43005 AC104759.1-201ENST00000559109 939 ntBASIC13.01□□□□□ -0.33
SLC1A1P43005 PSMD7-205ENST00000568615 931 ntTSL 2 BASIC13.01□□□□□ -0.33
SLC1A1P43005 LINC02182-201ENST00000569362 498 ntTSL 2 BASIC13.01□□□□□ -0.33
SLC1A1P43005 DSCR9-203ENST00000581640 472 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 AP005212.2-201ENST00000584979 510 ntBASIC13.01□□□□□ -0.33
SLC1A1P43005 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC13.01□□□□□ -0.33
SLC1A1P43005 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 AL117379.1-201ENST00000619319 677 ntBASIC13.01□□□□□ -0.33
SLC1A1P43005 AC020922.4-201ENST00000621389 339 ntBASIC13.01□□□□□ -0.33
SLC1A1P43005 LAMTOR5-AS1-234ENST00000625584 508 ntTSL 5 BASIC13.01□□□□□ -0.33
SLC1A1P43005 CYP17A1-205ENST00000638272 1227 ntTSL 5 BASIC13.01□□□□□ -0.33
SLC1A1P43005 EPM2A-213ENST00000638778 813 ntTSL 4 BASIC13.01□□□□□ -0.33
SLC1A1P43005 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
SLC1A1P43005 AL356583.1-201ENST00000398739 1371 ntBASIC13.01□□□□□ -0.33
SLC1A1P43005 CD1C-201ENST00000368170 1435 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 TRIB1-202ENST00000519576 1409 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 AOX3P-202ENST00000469595 1471 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 LINC00595-212ENST00000634933 1544 ntTSL 5 BASIC13.01□□□□□ -0.33
SLC1A1P43005 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 AC010148.1-203ENST00000413842 1652 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC13.01□□□□□ -0.33
SLC1A1P43005 SMAD9-201ENST00000350148 5447 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SLC1A1P43005 CACNA1D-228ENST00000638120 1830 ntTSL 2 BASIC13.01□□□□□ -0.33
SLC1A1P43005 AC073263.2-201ENST00000624835 1863 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms