Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.02□□□□□ -0.32
MTHFRP42898 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.02□□□□□ -0.32
MTHFRP42898 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MTHFRP42898 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
MTHFRP42898 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC13.02□□□□□ -0.33
MTHFRP42898 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC13.02□□□□□ -0.33
MTHFRP42898 TMTC4-201ENST00000328767 2101 ntTSL 2 BASIC13.02□□□□□ -0.33
MTHFRP42898 AL157414.1-201ENST00000366097 770 ntTSL 3 BASIC13.02□□□□□ -0.33
MTHFRP42898 CFAP58-201ENST00000369703 466 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
MTHFRP42898 IGLV1-44-201ENST00000390297 467 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
MTHFRP42898 PGAM1P4-201ENST00000397343 750 ntBASIC13.02□□□□□ -0.33
MTHFRP42898 HNRNPA1P46-201ENST00000411735 937 ntBASIC13.02□□□□□ -0.33
MTHFRP42898 DICER1-AS1-201ENST00000435343 723 ntTSL 3 BASIC13.02□□□□□ -0.33
MTHFRP42898 YBX1P7-201ENST00000436766 535 ntBASIC13.02□□□□□ -0.33
MTHFRP42898 AL118511.1-201ENST00000439341 794 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MTHFRP42898 LINC00337-202ENST00000441724 1138 ntTSL 3 BASIC13.02□□□□□ -0.33
MTHFRP42898 TPRG1-AS1-201ENST00000444488 697 ntTSL 3 BASIC13.02□□□□□ -0.33
MTHFRP42898 CNN2P1-201ENST00000453616 918 ntBASIC13.02□□□□□ -0.33
MTHFRP42898 LILRB1-AS1-201ENST00000456337 554 ntTSL 4 BASIC13.02□□□□□ -0.33
MTHFRP42898 RN7SL309P-201ENST00000491364 286 ntBASIC13.02□□□□□ -0.33
MTHFRP42898 AC008040.3-201ENST00000493762 1232 ntBASIC13.02□□□□□ -0.33
MTHFRP42898 AC020893.2-201ENST00000506083 723 ntBASIC13.02□□□□□ -0.33
MTHFRP42898 OR10V2P-201ENST00000525296 764 ntBASIC13.02□□□□□ -0.33
MTHFRP42898 AC087699.1-201ENST00000558111 393 ntBASIC13.02□□□□□ -0.33
MTHFRP42898 AC005921.2-201ENST00000574246 670 ntTSL 5 BASIC13.02□□□□□ -0.33
MTHFRP42898 AP000894.2-203ENST00000580612 439 ntTSL 3 BASIC13.02□□□□□ -0.33
MTHFRP42898 LINC00470-211ENST00000584492 1281 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MTHFRP42898 Metazoa_SRP.186-201ENST00000617234 362 ntBASIC13.02□□□□□ -0.33
MTHFRP42898 AC109826.1-203ENST00000624259 1105 ntTSL 5 BASIC13.02□□□□□ -0.33
MTHFRP42898 LINC01651-201ENST00000624642 350 ntTSL 5 BASIC13.02□□□□□ -0.33
MTHFRP42898 CFAP206-202ENST00000369562 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MTHFRP42898 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MTHFRP42898 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
MTHFRP42898 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC13.02□□□□□ -0.33
MTHFRP42898 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MTHFRP42898 CCNH-203ENST00000504878 1497 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MTHFRP42898 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MTHFRP42898 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MTHFRP42898 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MTHFRP42898 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MTHFRP42898 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MTHFRP42898 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
MTHFRP42898 AC006144.1-201ENST00000424220 1600 ntBASIC13.02□□□□□ -0.33
MTHFRP42898 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MTHFRP42898 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC13.02□□□□□ -0.33
MTHFRP42898 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MTHFRP42898 ARSG-202ENST00000452479 1733 ntTSL 5 BASIC13.02□□□□□ -0.33
MTHFRP42898 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MTHFRP42898 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
MTHFRP42898 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
MTHFRP42898 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MTHFRP42898 NELL2-203ENST00000429094 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MTHFRP42898 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC13.01□□□□□ -0.33
MTHFRP42898 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MTHFRP42898 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
MTHFRP42898 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC13.01□□□□□ -0.33
MTHFRP42898 AC092117.1-201ENST00000621230 3250 ntBASIC13.01□□□□□ -0.33
MTHFRP42898 PAM-203ENST00000346918 3302 ntTSL 5 BASIC13.01□□□□□ -0.33
MTHFRP42898 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC13.01□□□□□ -0.33
MTHFRP42898 HSPB11-204ENST00000371378 894 ntTSL 3 BASIC13.01□□□□□ -0.33
MTHFRP42898 CFAP36-205ENST00000407816 1125 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
MTHFRP42898 SSR4P1-201ENST00000415143 412 ntBASIC13.01□□□□□ -0.33
MTHFRP42898 AC006001.3-205ENST00000428370 579 ntBASIC13.01□□□□□ -0.33
MTHFRP42898 SYP-AS1-201ENST00000433499 542 ntTSL 2 BASIC13.01□□□□□ -0.33
MTHFRP42898 AL158824.1-201ENST00000451825 450 ntBASIC13.01□□□□□ -0.33
MTHFRP42898 GOLGA2-210ENST00000490628 428 ntTSL 2 BASIC13.01□□□□□ -0.33
MTHFRP42898 AC023194.3-202ENST00000524253 364 ntTSL 3 BASIC13.01□□□□□ -0.33
MTHFRP42898 MIR3689A-201ENST00000578854 78 ntBASIC13.01□□□□□ -0.33
MTHFRP42898 AC008013.1-201ENST00000612219 629 ntBASIC13.01□□□□□ -0.33
MTHFRP42898 BPIFA1-204ENST00000618484 907 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
MTHFRP42898 FP236383.2-201ENST00000625598 923 ntBASIC13.01□□□□□ -0.33
MTHFRP42898 FP236383.3-201ENST00000627981 923 ntBASIC13.01□□□□□ -0.33
MTHFRP42898 FP671120.3-201ENST00000631211 923 ntBASIC13.01□□□□□ -0.33
MTHFRP42898 NDRG4-254ENST00000569923 1312 ntTSL 2 BASIC13.01□□□□□ -0.33
MTHFRP42898 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
MTHFRP42898 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.01□□□□□ -0.33
MTHFRP42898 SPO11-201ENST00000345868 1666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MTHFRP42898 LRRC27-202ENST00000368612 1765 ntTSL 2 BASIC13.01□□□□□ -0.33
MTHFRP42898 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
MTHFRP42898 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
MTHFRP42898 RAB37-203ENST00000392612 2528 ntTSL 2 BASIC13.01□□□□□ -0.33
MTHFRP42898 CCDC144NL-201ENST00000327925 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
MTHFRP42898 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC13.01□□□□□ -0.33
MTHFRP42898 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 GPR12-202ENST00000405846 4850 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MTHFRP42898 DEDD-203ENST00000458050 2300 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MTHFRP42898 ELOVL1-216ENST00000621943 1625 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
MTHFRP42898 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 CSMD2-202ENST00000338325 1544 ntTSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 LMCD1-202ENST00000397386 1501 ntTSL 2 BASIC13□□□□□ -0.33
MTHFRP42898 SPATA22-203ENST00000397168 1457 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 ANXA13-202ENST00000419625 1469 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MTHFRP42898 SLC25A14-213ENST00000543953 1403 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
MTHFRP42898 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms